RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 GAS6Q14393 721 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 VWA3BQ502W6 1294 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 FIGNQ5HY92 759 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 SCARA5Q6ZMJ2 495 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TMTC1Q8IUR5 882 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 FUKQ8N0W3 1084 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 CCAR2Q8N163 923 aaKnown RBP11.21□□□□□ -0.61
LITAF-216ENST00000574848 SPEM1Q8N4L4 309 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TC2NQ8N9U0 490 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 SUMF1Q8NBK3 374 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 PDZD8Q8NEN9 1154 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 OSCP1Q8WVF1 389 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 SMARCD1Q96GM5 515 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 PCMTD1Q96MG8 357 aaPredicted RBP11.21□□□□□ -0.61
LITAF-216ENST00000574848 IMPG2Q9BZV3 1241 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 LMAN1LQ9HAT1 526 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 CYP3A43Q9HB55 503 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TMEM8AQ9HCN3 771 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 CSNK1G1Q9HCP0 422 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TRPC7Q9HCX4 862 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 DMAP1Q9NPF5 467 aaPredicted RBP11.21□□□□□ -0.61
LITAF-216ENST00000574848 GKN1Q9NS71 199 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 ZNHIT6Q9NWK9 470 aaKnown RBP11.21□□□□□ -0.61
LITAF-216ENST00000574848 ZSCAN32Q9NX65 697 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 TRPM5Q9NZQ8 1165 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 HMGXB4Q9UGU5 601 aa11.21□□□□□ -0.61
LITAF-216ENST00000574848 LUC7L2Q9Y383 392 aaKnown RBP11.21□□□□□ -0.61
LITAF-216ENST00000574848 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.62
LITAF-216ENST00000574848 RIF1Q5UIP0 2472 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 OTOL1A6NHN0 477 aaPredicted RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 CLDN5O00501 218 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 TRDMT1O14717 391 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 TNFRSF10BO14763 440 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 SLC16A3O15427 465 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 GYPCP04921 128 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 KRT13P13646 458 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 GCLMP48507 274 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 TUBP50607 506 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 NDST1P52848 882 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 MARSP56192 900 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 CSTF1Q05048 431 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 ADAM9Q13443 819 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 PPP2R5DQ14738 602 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 EML3Q32P44 896 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 TMEM196Q5HYL7 178 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 SNX30Q5VWJ9 437 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 TRIM68Q6AZZ1 485 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 SPOPLQ6IQ16 392 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 CC2D1AQ6P1N0 951 aaPredicted RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 ARL14EPQ8N8R7 260 aaPredicted RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 TAS1R2Q8TE23 839 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 ATP2A3Q93084 1043 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 SLITRK1Q96PX8 696 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 ERGIC2Q96RQ1 377 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 NIF3L1Q9GZT8 377 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 NDST4Q9H3R1 872 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 EBF3Q9H4W6 596 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 FAM124BQ9H5Z6 455 aaPredicted RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 APOBEC3GQ9HC16 384 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 METTL14Q9HCE5 456 aaKnown RBP11.2□□□□□ -0.62
LITAF-216ENST00000574848 KRT82Q9NSB4 513 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 PAXBP1Q9Y5B6 917 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 MYO16Q9Y6X6 1858 aa11.2□□□□□ -0.62
LITAF-216ENST00000574848 CILPO75339 1184 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 CCDC175P0C221 793 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ZDHHC11BP0C7U3 371 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 EPB41P11171 864 aaKnown RBP11.19□□□□□ -0.62
LITAF-216ENST00000574848 TNNT1P13805 278 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ARSAP15289 507 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 HDCP19113 662 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 HOXA6P31267 233 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 CASP14P31944 242 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 SLC5A3P53794 718 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ADKP55263 362 aaKnown RBP11.19□□□□□ -0.62
LITAF-216ENST00000574848 ZXDBP98169 803 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 AMPD2Q01433 879 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 TAF10Q12962 218 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 PON2Q15165 354 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 KRT39Q6A163 491 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 Q6ZS52 159 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ACOT1Q86TX2 421 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 C17orf53Q8N3J3 647 aaPredicted RBP11.19□□□□□ -0.62
LITAF-216ENST00000574848 CPA6Q8N4T0 437 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ZMIZ2Q8NF64 920 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 OR8K1Q8NGG5 319 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 SH3RF2Q8TEC5 729 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ELMO3Q96BJ8 720 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 C16orf45Q96MC5 204 aaPredicted RBP11.19□□□□□ -0.62
LITAF-216ENST00000574848 CYP2S1Q96SQ9 504 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 PNPLA8Q9NP80 782 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 RBM12Q9NTZ6 932 aaKnown RBP11.19□□□□□ -0.62
LITAF-216ENST00000574848 ABHD10Q9NUJ1 306 aa11.19□□□□□ -0.62
LITAF-216ENST00000574848 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms