RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ADIGQ0VDE8 80 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 OASLQ15646 514 aaKnown RBP29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 RAB6CQ53S08 254 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 INTS6LQ5JSJ4 861 aaKnown RBP29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 RAB41Q5JT25 222 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 COLGALT2Q8IYK4 626 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 SMOQ99835 787 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 RAB6CQ9H0N0 254 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 DNPEPQ9ULA0 475 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 PCDHB8Q9UN66 801 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 I3L4J1 428 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 ENPP3O14638 875 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 KIAA0355O15063 1070 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 DDHD2O94830 711 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 CD48P09326 243 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 IBSPP21815 317 aaPredicted RBP29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 MATKP42679 507 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 VCPP55072 806 aaKnown RBP29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 CDO1Q16878 200 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 STRADAQ7RTN6 431 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 CCDC89Q8N998 374 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 HSPH1Q92598 858 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 APBB2Q92870 758 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 SMARCD1Q96GM5 515 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 LRRC4Q9HBW1 653 aa29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 NGRNQ9NPE2 291 aaKnown RBP29.71■■■□□ 2.35
CTDNEP1-210ENST00000574322 DAB1O75553 588 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 AP1G2O75843 785 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 ITGAVP06756 1048 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 KLRC2P26717 231 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 HSD17B3P37058 310 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 ZNF280BQ86YH2 543 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 MAP7D3Q8IWC1 876 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 ZMIZ2Q8NF64 920 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 CCHCR1Q8TD31 782 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 NT5C3BQ969T7 300 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 SNF8Q96H20 258 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 CCDC114Q96M63 670 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 ZIM3Q96PE6 472 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 STAU2Q9NUL3 570 aaKnown RBP eCLIP29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 TBC1D13Q9NVG8 400 aa29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 MTRF1LQ9UGC7 380 aaKnown RBP29.7■■■□□ 2.34
CTDNEP1-210ENST00000574322 ALPK3Q96L96 1907 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 TP73O15350 636 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 OPA1O60313 960 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 B4GALT3O60512 393 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 CST8O60676 142 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 ITGB1P05556 798 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 RAG1P15918 1043 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 CYP2C18P33260 490 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 MAP3K7CLP57077 242 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 DHX9Q08211 1270 aaKnown RBP29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 CALCOCO2Q13137 446 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 UAP1Q16222 522 aaPredicted RBP29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 PAN2Q504Q3 1202 aaKnown RBP29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 LRIG3Q6UXM1 1119 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 DBF4BQ8NFT6 615 aa29.69■■■□□ 2.34
CTDNEP1-210ENST00000574322 CCL23P55773 120 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 YWHAZP63104 245 aaKnown RBP29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 CAV1Q03135 178 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 DPYSL3Q14195 570 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 MAPRE1Q15691 268 aaKnown RBP29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 OVOS1Q6IE37 1185 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 BNIPLQ7Z465 357 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 THEM5Q8N1Q8 247 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 ALLCQ8N6M5 410 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 SEPT8Q92599 483 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 SLC2A13Q96QE2 648 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 CNGB3Q9NQW8 809 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 ASIC3Q9UHC3 531 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 HHLA1C9JL84 531 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 APOC4-APOC2K7ER74 178 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 TIMP1P01033 207 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 APOC2P02655 101 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 TKTL1P51854 596 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 CDH6P55285 790 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 SLC25A52Q3SY17 297 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 RHBDF2Q6PJF5 856 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 ZNF365Q70YC5 407 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 SIX6OS1Q8N1H7 587 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 BBOF1Q8ND07 529 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 MYLPFQ96A32 169 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 FAM118BQ9BPY3 351 aa29.68■■■□□ 2.34
CTDNEP1-210ENST00000574322 NOS2P35228 1153 aa29.67■■■□□ 2.34
CTDNEP1-210ENST00000574322 TFDP2Q14188 446 aa29.67■■■□□ 2.34
CTDNEP1-210ENST00000574322 SNRNP25Q9BV90 132 aaKnown RBP29.67■■■□□ 2.34
CTDNEP1-210ENST00000574322 ADAM33Q9BZ11 813 aa29.67■■■□□ 2.34
CTDNEP1-210ENST00000574322 TMEM30AQ9NV96 361 aa29.67■■■□□ 2.34
CTDNEP1-210ENST00000574322 PARNO95453 639 aaKnown RBP29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 ATF2P15336 505 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 TFE3P19532 575 aaPredicted RBP29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 ITGB8P26012 769 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 ERMARDQ5T6L9 678 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 DEFB106AQ8N104 65 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 SCML4Q8N228 414 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 ACTL9Q8TC94 416 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 HASPINQ8TF76 798 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 SCLYQ96I15 445 aa29.66■■■□□ 2.34
CTDNEP1-210ENST00000574322 CALN1Q9BXU9 219 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms