RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 COBLL1Q53SF7 1204 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 DGKKQ5KSL6 1271 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 FSTL4Q6MZW2 842 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 FILIP1Q7Z7B0 1213 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 ZC3H3Q8IXZ2 948 aaKnown RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 FBXL13Q8NEE6 735 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 ATRIPQ8WXE1 791 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 ATP2A3Q93084 1043 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 FAXDC2Q96IV6 333 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 NT5C1AQ9BXI3 368 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 LINC00597Q9H2U6 94 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 CCSER2Q9H7U1 834 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 CYP3A43Q9HB55 503 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 POLR3BQ9NW08 1133 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 ZSCAN32Q9NX65 697 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 CHORDC1Q9UHD1 332 aaPredicted RBP10.57□□□□□ -0.72
RPA1-206ENST00000573994 CTNND2Q9UQB3 1225 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 PCDHGA2Q9Y5H1 932 aa10.57□□□□□ -0.72
RPA1-206ENST00000573994 RCCD1A6NED2 376 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 PSMA7O14818 248 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 COCHO43405 550 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 STX10O60499 249 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 OLFM2O95897 454 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 IRF1P10914 325 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 BMP6P22004 513 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 GJA4P35212 333 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 PPP1R2P41236 205 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 CXCL12P48061 93 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 COPS2P61201 443 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 SLC7A9P82251 487 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 FKBP3Q00688 224 aaKnown RBP10.56□□□□□ -0.72
RPA1-206ENST00000573994 AMPD2Q01433 879 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 LRRC63Q05C16 580 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 STIM1Q13586 685 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 PPP2R5DQ14738 602 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 LPAL2Q16609 132 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 TMEM196Q5HYL7 178 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 HECTD3Q5T447 861 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 HEATR6Q6AI08 1181 aaKnown RBP10.56□□□□□ -0.72
RPA1-206ENST00000573994 CLEC20AQ6ZU45 233 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 CRYBG2Q8N1P7 616 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 SPEM1Q8N4L4 309 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 KIAA1958Q8N8K9 716 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 PDZD8Q8NEN9 1154 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 P2RY13Q9BPV8 354 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 FAM124BQ9H5Z6 455 aaPredicted RBP10.56□□□□□ -0.72
RPA1-206ENST00000573994 FBRSL1Q9HCM7 1045 aaKnown RBP10.56□□□□□ -0.72
RPA1-206ENST00000573994 RAB20Q9NX57 234 aa10.56□□□□□ -0.72
RPA1-206ENST00000573994 SMG5Q9UPR3 1016 aaKnown RBP10.56□□□□□ -0.72
RPA1-206ENST00000573994 OTOGLQ3ZCN5 2332 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 CHURC1-FNTBB4DL54 471 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 TRDMT1O14717 391 aaKnown RBP10.55□□□□□ -0.72
RPA1-206ENST00000573994 NFATC1O95644 943 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 CYP17A1P05093 508 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 TCF3P15923 654 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 FNTBP49356 437 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 STX17P56962 302 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 LRMPQ12912 555 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 SRSF5Q13243 272 aaKnown RBP10.55□□□□□ -0.72
RPA1-206ENST00000573994 CCDC40Q4G0X9 1142 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 DCLK2Q8N568 766 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 TTC39CQ8N584 583 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 SUMF1Q8NBK3 374 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 ZBTB44Q8NCP5 570 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 OVCA2Q8WZ82 227 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 NELL1Q92832 810 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 SLC35C1Q96A29 364 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 CYFIP2Q96F07 1278 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 HNRNPABQ99729 332 aaKnown RBP10.55□□□□□ -0.72
RPA1-206ENST00000573994 DUSP9Q99956 384 aaKnown RBP10.55□□□□□ -0.72
RPA1-206ENST00000573994 NACA2Q9H009 215 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 CSNK1G1Q9HCP0 422 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 CISHQ9NSE2 258 aa10.55□□□□□ -0.72
RPA1-206ENST00000573994 ARMCX3Q9UH62 379 aaPredicted RBP10.55□□□□□ -0.72
RPA1-206ENST00000573994 A0A1W2PQH9 124 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 HHLA1C9JL84 531 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 K7ESF4 209 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 MDM4O15151 490 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 TLR5O60602 858 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 LILRB5O75023 590 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 TBX18O95935 607 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 ZDHHC11BP0C7U3 371 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 ACO1P21399 889 aaKnown RBP10.54□□□□□ -0.72
RPA1-206ENST00000573994 PXNP49023 591 aaPredicted RBP10.54□□□□□ -0.72
RPA1-206ENST00000573994 GALK1P51570 392 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 SEC13P55735 322 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 CUL2Q13617 745 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 MORC3Q14149 939 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 PPP1R26Q5T8A7 1209 aaPredicted RBP10.54□□□□□ -0.72
RPA1-206ENST00000573994 TTI2Q6NXR4 508 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 SYNPOQ8N3V7 929 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 SLC4A11Q8NBS3 891 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 EZH1Q92800 747 aaPredicted RBP10.54□□□□□ -0.72
RPA1-206ENST00000573994 CD101Q93033 1021 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 WBP2Q969T9 261 aa10.54□□□□□ -0.72
RPA1-206ENST00000573994 DHTKD1Q96HY7 919 aaPredicted RBP10.54□□□□□ -0.72
RPA1-206ENST00000573994 HEXIM2Q96MH2 286 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms