RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 TGFB1I1O43294 461 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 STX6O43752 255 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 SIN3BO75182 1162 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 IL18RAPO95256 599 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 EGFP01133 1207 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 GAP43P17677 238 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 CASP4P49662 377 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 STK38Q15208 465 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 SLFN12LQ6IEE8 588 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 DGLUCYQ7Z3D6 616 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 NELFCDQ8IXH7 590 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 ADGRF2Q8IZF7 708 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 SYCP3Q8IZU3 236 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 CMTM8Q8IZV2 173 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 CSGALNACT2Q8N6G5 542 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 LEMD2Q8NC56 503 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 BPIFB1Q8TDL5 484 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 MYLPFQ96A32 169 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 HVCN1Q96D96 273 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 ZNF560Q96MR9 790 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 FAM83CQ9BQN1 747 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 MRPL45Q9BRJ2 306 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 BACH2Q9BYV9 841 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 TRIM9Q9C026 710 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 SEMA4AQ9H3S1 761 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 DPEP3Q9H4B8 488 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 TRPV5Q9NQA5 729 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 GKN1Q9NS71 199 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 RXFP3Q9NSD7 469 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 DLL3Q9NYJ7 618 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 HSPBP1Q9NZL4 362 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 CCDC39Q9UFE4 941 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 KCNG1Q9UIX4 513 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 MAFFQ9ULX9 164 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 USP18Q9UMW8 372 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 MRPS17Q9Y2R5 130 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 PCDHB5Q9Y5E4 795 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 WNT6Q9Y6F9 365 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 LAMA1P25391 3075 aa9.89□□□□□ -0.83
NPLOC4-210ENST00000572824 THADAQ6YHU6 1953 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 PDGFRBP09619 1106 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 GARTP22102 1010 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ADH6P28332 368 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 CDC25CP30307 473 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 MAGEA9P43362 315 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 RAP1GAPP47736 663 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 CYP2J2P51589 502 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ATXN1P54253 815 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ASIC1P78348 528 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ORC1Q13415 861 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 VEPH1Q14D04 833 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ARHGAP15Q53QZ3 475 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 CCDC73Q6ZRK6 1079 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ITIH5Q86UX2 942 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 METTL23Q86XA0 190 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 SCN4BQ8IWT1 228 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 GPD1LQ8N335 351 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ARL14EPQ8N8R7 260 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 OR13H1Q8NG92 308 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 SPPL2BQ8TCT7 592 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 HHIPQ96QV1 700 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 NELL2Q99435 816 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 SYT15Q9BQS2 421 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ZDHHC4Q9NPG8 344 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 INTS13Q9NVM9 706 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 SEL1LQ9UBV2 794 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 DSEQ9UL01 958 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 ASB3Q9Y575 518 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 GON4LQ3T8J9 2241 aa9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 TNRC6BQ9UPQ9 1833 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-210ENST00000572824 CLDN5O00501 218 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 GABRDO14764 452 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 SPTLC2O15270 562 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 NCAM2O15394 837 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 PHACTR2O75167 634 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 NOL4O94818 638 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 CST3P01034 146 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 TMEM191BP0C7N4 346 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 PDCP20941 246 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 BDNFP23560 247 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 CXCL12P48061 93 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 TUFMP49411 452 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 CCR3P51677 355 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 TSPY1Q01534 308 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 CUL4BQ13620 913 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 ZNF77Q15935 545 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 GAB4Q2WGN9 574 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 ARHGAP29Q52LW3 1261 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 LIMS2Q7Z4I7 341 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 RALGPS2Q86X27 583 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 THEM5Q8N1Q8 247 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 SPEM1Q8N4L4 309 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 SCFD1Q8WVM8 642 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 WBP2Q969T9 261 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 TSPAN18Q96SJ8 248 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 OXCT2Q9BYC2 517 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 LINC00597Q9H2U6 94 aa9.87□□□□□ -0.83
NPLOC4-210ENST00000572824 SMYD3Q9H7B4 428 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms