RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 RAB41Q5JT25 222 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 DDX42Q86XP3 938 aaKnown RBP eCLIP21.76■■□□□ 1.07
CHMP6-204ENST00000572778 CPA6Q8N4T0 437 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 VPS16Q9H269 839 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 LINC00597Q9H2U6 94 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 DLGAP2Q9P1A6 1054 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.76■■□□□ 1.07
CHMP6-204ENST00000572778 CNTN6Q9UQ52 1028 aa21.76■■□□□ 1.07
CHMP6-204ENST00000572778 OTOL1A6NHN0 477 aaPredicted RBP21.75■■□□□ 1.07
CHMP6-204ENST00000572778 M0QYV0 167 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 SCAMP3O14828 347 aaKnown RBP21.75■■□□□ 1.07
CHMP6-204ENST00000572778 TPM2P07951 284 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 RARGP13631 454 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 ATP5C1P36542 298 aaKnown RBP21.75■■□□□ 1.07
CHMP6-204ENST00000572778 PSEN1P49768 467 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 TCF15Q12870 199 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 EML3Q32P44 896 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 PKDCCQ504Y2 493 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 CDKAL1Q5VV42 579 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 C1orf228Q6PIY5 440 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 TXNDC11Q6PKC3 985 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 SCD5Q86SK9 330 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 SECISBP2LQ93073 1101 aaKnown RBP21.75■■□□□ 1.07
CHMP6-204ENST00000572778 ATP2A3Q93084 1043 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 ULBP1Q9BZM6 244 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 ECT2Q9H8V3 914 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 SIX2Q9NPC8 291 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 CYLDQ9NQC7 956 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.75■■□□□ 1.07
CHMP6-204ENST00000572778 DNAJC12Q9UKB3 198 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 NUDT5Q9UKK9 219 aa21.75■■□□□ 1.07
CHMP6-204ENST00000572778 DENND4CQ5VZ89 1909 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 H0Y858 1186 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 LETM1O95202 739 aaPredicted RBP21.74■■□□□ 1.07
CHMP6-204ENST00000572778 ZBED1O96006 694 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 IRF1P10914 325 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 RALAP11233 206 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 PLA2G4AP47712 749 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 RGS7P49802 495 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 KCNMA1Q12791 1236 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 PON2Q15165 354 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 KRT31Q15323 416 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 C10orf120Q5SQS8 335 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 ARHGAP18Q8N392 663 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 ZFRQ96KR1 1074 aaKnown RBP21.74■■□□□ 1.07
CHMP6-204ENST00000572778 LMAN1LQ9HAT1 526 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 SH3BP1Q9Y3L3 701 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 KMT2EQ8IZD2 1858 aa21.74■■□□□ 1.07
CHMP6-204ENST00000572778 SLC9A3R1O14745 358 aaPredicted RBP21.73■■□□□ 1.07
CHMP6-204ENST00000572778 THAP12O43422 761 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 LCP1P13796 627 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 GNA15P30679 374 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 AMPD2Q01433 879 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 ADIGQ0VDE8 80 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 NR1H3Q13133 447 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 ANO6Q4KMQ2 910 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 TADA2BQ86TJ2 420 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 SIX6OS1Q8N1H7 587 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 ANKRD20A12PQ8NF67 263 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 SLC35F5Q8WV83 523 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 KCTD13Q8WZ19 329 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 NDRG1Q92597 394 aaKnown RBP21.73■■□□□ 1.07
CHMP6-204ENST00000572778 CLDN23Q96B33 292 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 NAT10Q9H0A0 1025 aaKnown RBP21.73■■□□□ 1.07
CHMP6-204ENST00000572778 CLIC5Q9NZA1 410 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 DNMT3LQ9UJW3 386 aa21.73■■□□□ 1.07
CHMP6-204ENST00000572778 AJAP1Q9UKB5 411 aaPredicted RBP21.73■■□□□ 1.07
CHMP6-204ENST00000572778 TICRRQ7Z2Z1 1910 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 ZNF318Q5VUA4 2279 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 BECN2A8MW95 431 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 MDM4O15151 490 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 MED7O43513 233 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 NFATC1O95644 943 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 CDK11BP21127 795 aaKnown RBP21.72■■□□□ 1.07
CHMP6-204ENST00000572778 MAGEA9P43362 315 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 FZD5Q13467 585 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 PMF1Q6P1K2 205 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 ZNF687Q8N1G0 1237 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 AOPEPQ8N6M6 819 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 SHC3Q92529 594 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 LSM14BQ9BX40 385 aaKnown RBP21.72■■□□□ 1.07
CHMP6-204ENST00000572778 ACP6Q9NPH0 428 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 SPATA6Q9NWH7 488 aaPredicted RBP21.72■■□□□ 1.07
CHMP6-204ENST00000572778 ANAPC1Q9H1A4 1944 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 COL4A2P08572 1712 aa21.72■■□□□ 1.07
CHMP6-204ENST00000572778 E2F8A0AVK6 867 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 PIK3R2O00459 728 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 PTMSP20962 102 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 GJA4P35212 333 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 RPS9P46781 194 aaKnown RBP21.71■■□□□ 1.07
CHMP6-204ENST00000572778 YWHAGP61981 247 aaKnown RBP eCLIP21.71■■□□□ 1.07
CHMP6-204ENST00000572778 GOLGA8FQ08AF8 430 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 GOLGA8DPQ0D2H9 430 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 ANGPT1Q15389 498 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 KLHL40Q2TBA0 621 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 PM20D1Q6GTS8 502 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 DENND1BQ6P3S1 775 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 KLHDC10Q6PID8 442 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 C1orf210Q8IVY1 113 aa21.71■■□□□ 1.07
CHMP6-204ENST00000572778 KIAA1958Q8N8K9 716 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms