RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 PTPN1P18031 435 aaKnown RBP21.1■□□□□ 0.97
CCDC40-206ENST00000572083 YWHAQP27348 245 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 SCAPQ12770 1279 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 EGFLAMQ63HQ2 1017 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 LARP1BQ659C4 914 aaKnown RBP21.1■□□□□ 0.97
CCDC40-206ENST00000572083 TRIML1Q8N9V2 468 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 WBP2Q969T9 261 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 OTUB2Q96DC9 234 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 CLIC6Q96NY7 704 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 CD93Q9NPY3 652 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 PANK4Q9NVE7 773 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 DNAAF2Q9NVR5 837 aaKnown RBP21.1■□□□□ 0.97
CCDC40-206ENST00000572083 SMC3Q9UQE7 1217 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 GPSM3Q9Y4H4 160 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 CLIC4Q9Y696 253 aa21.1■□□□□ 0.97
CCDC40-206ENST00000572083 A0A1W2PQF6 199 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 FRMD3A2A2Y4 597 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 ZNF233A6NK53 670 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 SYPP08247 313 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 NDUFV2P19404 249 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 NTSR1P30989 418 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 RABEP1Q15276 862 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 TRIP6Q15654 476 aaKnown RBP21.09■□□□□ 0.97
CCDC40-206ENST00000572083 TRAPPC11Q7Z392 1133 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 TMEM25Q86YD3 366 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 WDR49Q8IV35 697 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 NUP93Q8N1F7 819 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 PNPLA1Q8N8W4 532 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 GLIS3Q8NEA6 775 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 ACOX2Q99424 681 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 CCSER2Q9H7U1 834 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 SPHK2Q9NRA0 654 aa21.09■□□□□ 0.97
CCDC40-206ENST00000572083 FBXO2Q9UK22 296 aaPredicted RBP21.09■□□□□ 0.97
CCDC40-206ENST00000572083 TACC1O75410 805 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 TXLNAP40222 546 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 HNRNPDQ14103 355 aaKnown RBP21.08■□□□□ 0.97
CCDC40-206ENST00000572083 SURF1Q15526 300 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 PREPLQ4J6C6 727 aaPredicted RBP21.08■□□□□ 0.97
CCDC40-206ENST00000572083 HECTD3Q5T447 861 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 RGL4Q8IZJ4 473 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 SPRYD3Q8NCJ5 442 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 PDZD8Q8NEN9 1154 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 KCNV2Q8TDN2 545 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 B3GNT5Q9BYG0 378 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 SLC6A17Q9H1V8 727 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 HSPBP1Q9NZL4 362 aa21.08■□□□□ 0.97
CCDC40-206ENST00000572083 CHORDC1Q9UHD1 332 aaPredicted RBP21.08■□□□□ 0.97
CCDC40-206ENST00000572083 IGSF10Q6WRI0 2623 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 A0A1W2PQD8 194 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 KIAA0391O15091 583 aaKnown RBP21.07■□□□□ 0.96
CCDC40-206ENST00000572083 ZNF217O75362 1048 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 GJB3O75712 270 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 RTN3O95197 1032 aaPredicted RBP21.07■□□□□ 0.96
CCDC40-206ENST00000572083 CST3P01034 146 aaPredicted RBP21.07■□□□□ 0.96
CCDC40-206ENST00000572083 FTH1P19P0C7X4 201 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 DLATP10515 647 aaKnown RBP21.07■□□□□ 0.96
CCDC40-206ENST00000572083 TNNC1P63316 161 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 PLEKHG6Q3KR16 790 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 NUDT18Q6ZVK8 323 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 NAXDQ8IW45 347 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 CHPFQ8IZ52 775 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 B3GALNT2Q8NCR0 500 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 SCAMP5Q8TAC9 235 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 IPO4Q8TEX9 1081 aaKnown RBP21.07■□□□□ 0.96
CCDC40-206ENST00000572083 OVCA2Q8WZ82 227 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 HPS3Q969F9 1004 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 KCNK16Q96T55 309 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 CD248Q9HCU0 757 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 DNAJC17Q9NVM6 304 aaKnown RBP21.07■□□□□ 0.96
CCDC40-206ENST00000572083 PCDHB9Q9Y5E1 797 aa21.07■□□□□ 0.96
CCDC40-206ENST00000572083 GCN1Q92616 2671 aaKnown RBP21.06■□□□□ 0.96
CCDC40-206ENST00000572083 A8MXQ7 604 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 COL28A1Q2UY09 1125 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 WDR72Q3MJ13 1102 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 GRAMD4Q6IC98 578 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 RDH13Q8NBN7 331 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 ADAMTS14Q8WXS8 1223 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 PANK2Q9BZ23 570 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 GMIPQ9P107 970 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 SRPRBQ9Y5M8 271 aaKnown RBP21.06■□□□□ 0.96
CCDC40-206ENST00000572083 RAD54BQ9Y620 910 aa21.06■□□□□ 0.96
CCDC40-206ENST00000572083 A0A087X0B3 334 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 NEDD8-MDP1E9PL57 170 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 ZBTB24O43167 697 aaPredicted RBP21.05■□□□□ 0.96
CCDC40-206ENST00000572083 TNNI1P19237 187 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 STAT6P42226 847 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 SLC5A3P53794 718 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 SLC14A1Q13336 389 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 PDZD3Q86UT5 571 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 NACA2Q9H009 215 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 NXF1Q9UBU9 619 aaKnown RBP21.05■□□□□ 0.96
CCDC40-206ENST00000572083 STARD13Q9Y3M8 1113 aa21.05■□□□□ 0.96
CCDC40-206ENST00000572083 VPS37CA5D8V6 355 aaPredicted RBP21.04■□□□□ 0.96
CCDC40-206ENST00000572083 NDUFS2O75306 463 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 MAOBP27338 520 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 GRIK2Q13002 908 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 SNRNP35Q16560 246 aaKnown RBP21.04■□□□□ 0.96
CCDC40-206ENST00000572083 SOWAHCQ53LP3 525 aaPredicted RBP21.04■□□□□ 0.96
CCDC40-206ENST00000572083 SDE2Q6IQ49 451 aa21.04■□□□□ 0.96
CCDC40-206ENST00000572083 CCDC73Q6ZRK6 1079 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms