RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 C10orf76Q5T2E6 689 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 ERICH6BQ5W0A0 696 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 EGFLAMQ63HQ2 1017 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 EPM2AIP1Q7L775 607 aaPredicted RBP20.37■□□□□ 0.85
NUP88-203ENST00000572019 NUP93Q8N1F7 819 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 CHCHD4Q8N4Q1 142 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 P2RY11Q96G91 374 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 CAMK1GQ96NX5 476 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 CGRRF1Q99675 332 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 ELOVL4Q9GZR5 314 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 AGPAT3Q9NRZ7 376 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 GMIPQ9P107 970 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 NXF1Q9UBU9 619 aaKnown RBP20.37■□□□□ 0.85
NUP88-203ENST00000572019 MSRB2Q9Y3D2 182 aa20.37■□□□□ 0.85
NUP88-203ENST00000572019 PTPRBP23467 1997 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 NBEAQ8NFP9 2946 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 IGHV1OR15-9A0A0B4J2B8 117 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 KIAA0391O15091 583 aaKnown RBP20.36■□□□□ 0.85
NUP88-203ENST00000572019 HOXC11O43248 304 aaPredicted RBP20.36■□□□□ 0.85
NUP88-203ENST00000572019 GREM1O60565 184 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 CAPNS1P04632 268 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 IRF1P10914 325 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 CD59P13987 128 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 TNNI1P19237 187 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 CASP4P49662 377 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 CYP2J2P51589 502 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 GAD2Q05329 585 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 CYP24A1Q07973 514 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 SURF1Q15526 300 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 CCDC65Q8IXS2 484 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 TERB1Q8NA31 727 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 PLEKHO2Q8TD55 490 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 SDCBP2Q9H190 292 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 SLC32A1Q9H598 525 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 EHD2Q9NZN4 543 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 TBC1D14Q9P2M4 693 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 SLC6A14Q9UN76 642 aa20.36■□□□□ 0.85
NUP88-203ENST00000572019 ANKRD11Q6UB99 2663 aaPredicted RBP20.35■□□□□ 0.85
NUP88-203ENST00000572019 A8MXQ7 604 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 BEST1O76090 585 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 HOXB2P14652 356 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 SLC5A3P53794 718 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 TNNC1P63316 161 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 ZNF33AQ06730 810 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 PSMD6Q15008 389 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 E2F4Q16254 413 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 ANO4Q32M45 955 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 HECTD3Q5T447 861 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 TOGARAM2Q6ZUX3 1019 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 FAM35AQ86V20 835 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 MINDY1Q8N5J2 469 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 ZMIZ2Q8NF64 920 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 SPHK2Q9NRA0 654 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 RAD54BQ9Y620 910 aa20.35■□□□□ 0.85
NUP88-203ENST00000572019 UPK3BL1B0FP48 263 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.34■□□□□ 0.85
NUP88-203ENST00000572019 UPK3BL2E5RIL1 263 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 SERPINF2P08697 491 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 ZDHHC11BP0C7U3 371 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 NDUFV2P19404 249 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 CASP1P29466 404 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 ORC1Q13415 861 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 CUL4AQ13619 759 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 DUOXA1Q1HG43 343 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 SPDYCQ5MJ68 293 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 LRSAM1Q6UWE0 723 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 DDX42Q86XP3 938 aaKnown RBP eCLIP20.34■□□□□ 0.85
NUP88-203ENST00000572019 NELFCDQ8IXH7 590 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 ZNF507Q8TCN5 953 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 IL37Q9NZH6 218 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 DEC1Q9P2X7 70 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 CYP8B1Q9UNU6 501 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 LHX6Q9UPM6 363 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 SH3BP1Q9Y3L3 701 aa20.34■□□□□ 0.85
NUP88-203ENST00000572019 PRRT4C9JH25 899 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 AP5Z1O43299 807 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 TBX18O95935 607 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 SYT1P21579 422 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 GFPT1Q06210 699 aaPredicted RBP20.33■□□□□ 0.85
NUP88-203ENST00000572019 SLC39A14Q15043 492 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 SNX30Q5VWJ9 437 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 FUKQ8N0W3 1084 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 TRIML1Q8N9V2 468 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 SCFD1Q8WVM8 642 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 HSPA12BQ96MM6 686 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 KBTBD4Q9NVX7 518 aa20.33■□□□□ 0.85
NUP88-203ENST00000572019 LAMA5O15230 3695 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 RTN3O95197 1032 aaPredicted RBP20.32■□□□□ 0.84
NUP88-203ENST00000572019 MAOBP27338 520 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 NTSR1P30989 418 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 HOXD12P35452 270 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 SCARA5Q6ZMJ2 495 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 RAB44Q7Z6P3 723 aaPredicted RBP20.32■□□□□ 0.84
NUP88-203ENST00000572019 IPO4Q8TEX9 1081 aaKnown RBP20.32■□□□□ 0.84
NUP88-203ENST00000572019 OVCA2Q8WZ82 227 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 OTUB2Q96DC9 234 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 SMOQ99835 787 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 DNAJC17Q9NVM6 304 aaKnown RBP20.32■□□□□ 0.84
NUP88-203ENST00000572019 OSER1Q9NX31 292 aa20.32■□□□□ 0.84
NUP88-203ENST00000572019 HMGXB4Q9UGU5 601 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms