RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 ULBP1Q9BZM6 244 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 CNGB3Q9NQW8 809 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 ZDHHC18Q9NUE0 388 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 GRHL1Q9NZI5 618 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 NEU2Q9Y3R4 380 aa23.56■■□□□ 1.36
VCPKMT-205ENST00000569518 NRP1O14786 923 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 LIASO43766 372 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 BDNFP23560 247 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 RPL21P46778 160 aaKnown RBP23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 DAOAP59103 153 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 OTUD1Q5VV17 481 aaPredicted RBP23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 BNIPLQ7Z465 357 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 DEFB106AQ8N104 65 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 MREGQ8N565 214 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 ANKLE1Q8NAG6 615 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 ATL2Q8NHH9 583 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 GRK7Q8WTQ7 553 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 FAM118BQ9BPY3 351 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 MARCH5Q9NX47 278 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 FEZ2Q9UHY8 353 aaPredicted RBP23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 ADAM28Q9UKQ2 775 aa23.55■■□□□ 1.36
VCPKMT-205ENST00000569518 SPDYE4A6NLX3 237 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 SYN3O14994 580 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 MDM4O15151 490 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 HSPA8P11142 646 aaKnown RBP23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 KRT17Q04695 432 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 SLC25A52Q3SY17 297 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 STRADAQ7RTN6 431 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 DEFB128Q7Z7B8 93 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 FAM149B1Q96BN6 582 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 MRPL9Q9BYD2 267 aaKnown RBP23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 DMAP1Q9NPF5 467 aaPredicted RBP23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 CALCOCO1Q9P1Z2 691 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 HCSTQ9UBK5 93 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 ATP11BQ9Y2G3 1177 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 SNX24Q9Y343 169 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 TADA2AO75478 443 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 SLC11A1P49279 550 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 PTK6Q13882 451 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 DPYSL3Q14195 570 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 ZDHHC24Q6UX98 284 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 HFE2Q6ZVN8 426 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 BHLHA9Q7RTU4 235 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 KRT222Q8N1A0 295 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 FAM71BQ8TC56 605 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 SNRNP25Q9BV90 132 aaKnown RBP23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 ZCWPW1Q9H0M4 648 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 PNPLA8Q9NP80 782 aa23.54■■□□□ 1.36
VCPKMT-205ENST00000569518 LTBP2Q14767 1821 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 GBP1P32455 592 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 CDH6P55285 790 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 PDK2Q15119 407 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 SCYL2Q6P3W7 929 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 VSIG1Q86XK7 387 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 TSEN2Q8NCE0 465 aaKnown RBP23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 NKD2Q969F2 451 aaPredicted RBP23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 NPY6RQ99463 290 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 DNPEPQ9ULA0 475 aa23.53■■□□□ 1.36
VCPKMT-205ENST00000569518 YJEFN3A6XGL0 299 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 E7ENQ6 273 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 CST8O60676 142 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 GAS8O95995 478 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 FYNP06241 537 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 NOS2P35228 1153 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 ATXN1P54253 815 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 PPP1R7Q15435 360 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 SCML4Q8N228 414 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 SLC35B2Q8TB61 432 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 TMEM175Q9BSA9 504 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 CALN1Q9BXU9 219 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 POPDC2Q9HBU9 364 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 COL4A6Q14031 1691 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 TBKBP1A7MCY6 615 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 ZBED1O96006 694 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 CLTBP09497 229 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 HSPA9P38646 679 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 BCAR1P56945 870 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 BYSLQ13895 437 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 MRPL58Q14197 206 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 OASLQ15646 514 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 DCAF6Q58WW2 860 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 ZC3H12AQ5D1E8 599 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 VARS2Q5ST30 1063 aaKnown RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 CNKSR3Q6P9H4 555 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 C4orf50Q6ZRC1 276 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 CCDC114Q96M63 670 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 COLEC11Q9BWP8 271 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 FRMD8P1Q9BZ68 369 aaPredicted RBP23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 GPR62Q9BZJ7 368 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 PCDH18Q9HCL0 1135 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 TMEM39AQ9NV64 488 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 GPATCH2LQ9NWQ4 482 aa23.52■■□□□ 1.36
VCPKMT-205ENST00000569518 ALDH2P05091 517 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 USP17L7P0C7H9 530 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 IL4RP24394 825 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 IVDP26440 423 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 VCPP55072 806 aaKnown RBP23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 C1QTNF8P60827 252 aa23.51■■□□□ 1.35
VCPKMT-205ENST00000569518 PITX1P78337 314 aaPredicted RBP23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms