RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 EIF2DP41214 584 aaKnown RBP8.26□□□□□ -1.09
CDH3-209ENST00000569080 FMO5P49326 533 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 FNTBP49356 437 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 KIF11P52732 1056 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 NRLP54845 237 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 SRSF5Q13243 272 aaKnown RBP8.26□□□□□ -1.09
CDH3-209ENST00000569080 CUL2Q13617 745 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 PPP2R5DQ14738 602 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 DHCR24Q15392 516 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 FBXO43Q4G163 708 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 ZNF394Q53GI3 561 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 RAB41Q5JT25 222 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 HECTD3Q5T447 861 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 TCERG1LQ5VWI1 586 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 ISM2Q6H9L7 571 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 RHBDF2Q6PJF5 856 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 BHLHA9Q7RTU4 235 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 CCDC186Q7Z3E2 898 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 SCD5Q86SK9 330 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 WDR5BQ86VZ2 330 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 LONP2Q86WA8 852 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 TTC30AQ86WT1 665 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 ETFBKMTQ8IXQ9 262 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 ADGRG2Q8IZP9 1017 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 PHTF2Q8N3S3 785 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 LMO3Q8TAP4 145 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 CD101Q93033 1021 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 JAKMIP2Q96AA8 810 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 P2RY11Q96G91 374 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 CEP63Q96MT8 703 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 MED15Q96RN5 788 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 DUSP16Q9BY84 665 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 FBXO44Q9H4M3 255 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 HOOK1Q9UJC3 728 aaKnown RBP8.26□□□□□ -1.09
CDH3-209ENST00000569080 CTNND2Q9UQB3 1225 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 SPAG17Q6Q759 2223 aa8.26□□□□□ -1.09
CDH3-209ENST00000569080 CCDC163A0A0D9SF12 145 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 A0A1W2PQH9 124 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 K7EQS6 105 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 TULP2O00295 520 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 SLC9A3R1O14745 358 aaPredicted RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 HOXC11O43248 304 aaPredicted RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 TBX18O95935 607 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 ACO1P21399 889 aaKnown RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 PPP1R2P41236 205 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 MARSP56192 900 aaKnown RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 AMPD2Q01433 879 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 STIM1Q13586 685 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 KLHL10Q6JEL2 608 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 KLHDC10Q6PID8 442 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 Q6ZNB5 142 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 TRIM59Q8IWR1 403 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 BBS7Q8IWZ6 715 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 TTC39CQ8N584 583 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 CCDC150Q8NCX0 1101 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 RPLP0P6Q8NHW5 317 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 USP33Q8TEY7 942 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 NELFBQ8WX92 580 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 KAT5Q92993 513 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 OTUB2Q96DC9 234 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 TMEM176AQ96HP8 235 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 KLF16Q9BXK1 252 aaPredicted RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 METTL14Q9HCE5 456 aaKnown RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 PARD6AQ9NPB6 346 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 TLR8Q9NR97 1041 aaKnown RBP8.25□□□□□ -1.09
CDH3-209ENST00000569080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDH3-209ENST00000569080 PLXND1Q9Y4D7 1925 aa8.25□□□□□ -1.09
CDH3-209ENST00000569080 O00370 1275 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 BIN1O00499 593 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 MDM4O15151 490 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 ADH1CP00326 375 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 ADH5P11766 374 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 RARGP13631 454 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 HNRNPLP14866 589 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDH3-209ENST00000569080 SLC6A11P48066 632 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 PXNP49023 591 aaPredicted RBP8.24□□□□□ -1.09
CDH3-209ENST00000569080 ZNF132P52740 706 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 UBE2HP62256 183 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 NR1H3Q13133 447 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 PAK1Q13153 545 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 GOLGA7BQ2TAP0 167 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 LY6G5CQ5SRR4 150 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 HEATR6Q6AI08 1181 aaKnown RBP8.24□□□□□ -1.09
CDH3-209ENST00000569080 LAIR1Q6GTX8 287 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 HTR3DQ70Z44 454 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 SYT13Q7L8C5 426 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 PIGZQ86VD9 579 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 KIAA2013Q8IYS2 634 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 ZNF276Q8N554 614 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 TRIML1Q8N9V2 468 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 ANKRD52Q8NB46 1076 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 HHIPQ96QV1 700 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 ZSWIM1Q9BR11 485 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 CLIC5Q9NZA1 410 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 TBC1D14Q9P2M4 693 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 NUDT5Q9UKK9 219 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 TSPAN16Q9UKR8 245 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 HCN2Q9UL51 889 aa8.24□□□□□ -1.09
CDH3-209ENST00000569080 MUC22E2RYF6 1773 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms