RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 FBRSL1Q9HCM7 1045 aaKnown RBP13.64□□□□□ -0.23
TSC2-220ENST00000568238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.236e-6■■■■■ 48.1
TSC2-220ENST00000568238 FAM49BQ9NUQ9 324 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 USP18Q9UMW8 372 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 SLC8A2Q9UPR5 921 aa13.64□□□□□ -0.23
TSC2-220ENST00000568238 NCOR2Q9Y618 2525 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 SDK1Q7Z5N4 2213 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 SLC9A3R1O14745 358 aaPredicted RBP13.63□□□□□ -0.23
TSC2-220ENST00000568238 TNFRSF10BO14763 440 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 HRO43593 1189 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 HOXC13P31276 330 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 TUBP50607 506 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 LMNB2Q03252 620 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 PPP3CAQ08209 521 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 INCA1Q0VD86 236 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 HECTD3Q5T447 861 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 CEP68Q76N32 757 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 AOPEPQ8N6M6 819 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 CCDC150Q8NCX0 1101 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 RPLP0P6Q8NHW5 317 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 SCAMP5Q8TAC9 235 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 TAS1R2Q8TE23 839 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 ACDQ96AP0 544 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 NAT10Q9H0A0 1025 aaKnown RBP13.63□□□□□ -0.23
TSC2-220ENST00000568238 METTL14Q9HCE5 456 aaKnown RBP13.63□□□□□ -0.23
TSC2-220ENST00000568238 CFAP97Q9P2B7 532 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 NFE2L3Q9Y4A8 694 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 SPTBN2O15020 2390 aa13.63□□□□□ -0.23
TSC2-220ENST00000568238 CCDC163A0A0D9SF12 145 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 SCAMP3O14828 347 aaKnown RBP13.62□□□□□ -0.23
TSC2-220ENST00000568238 COCHO43405 550 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 GNA14O95837 355 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 CYP17A1P05093 508 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 RETP07949 1114 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 FAM200BP0CF97 657 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 PXNP49023 591 aaPredicted RBP13.62□□□□□ -0.23
TSC2-220ENST00000568238 MYL5Q02045 173 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 PUM1Q14671 1186 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSC2-220ENST00000568238 SNX30Q5VWJ9 437 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 IRF2BP1Q8IU81 584 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 CRYBG2Q8N1P7 616 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 C12orf29Q8N999 325 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 ZMIZ2Q8NF64 920 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 CCDC26Q8TAB7 109 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 ENOX1Q8TC92 643 aaKnown RBP13.62□□□□□ -0.23
TSC2-220ENST00000568238 EZH1Q92800 747 aaPredicted RBP13.62□□□□□ -0.23
TSC2-220ENST00000568238 HHIPQ96QV1 700 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 SMOQ99835 787 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 THAP9Q9H5L6 903 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 CYP3A43Q9HB55 503 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 APOBEC3GQ9HC16 384 aaKnown RBP13.62□□□□□ -0.23
TSC2-220ENST00000568238 TMEM8AQ9HCN3 771 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 CSNK1G1Q9HCP0 422 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 PARD6AQ9NPB6 346 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 SAMSN1Q9NSI8 373 aaKnown RBP13.62□□□□□ -0.23
TSC2-220ENST00000568238 COMMD8Q9NX08 183 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 IL37Q9NZH6 218 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 GMIPQ9P107 970 aa13.62□□□□□ -0.23
TSC2-220ENST00000568238 FAM92AA1XBS5 289 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 PRR5-ARHGAP8B1AHC4 643 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 STX10O60499 249 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 LRP3O75074 770 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 RPP40O75818 363 aaKnown RBP13.61□□□□□ -0.23
TSC2-220ENST00000568238 ADH1CP00326 375 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 ZDHHC11BP0C7U3 371 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 CD58P19256 250 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 TGM1P22735 817 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 ADORA2BP29275 332 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 GTF2H1P32780 548 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 OPRD1P41143 372 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 MTIF2P46199 727 aaKnown RBP13.61□□□□□ -0.23
TSC2-220ENST00000568238 MXI1P50539 228 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 MAP3K7CLP57077 242 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 ARHGAP8P85298 464 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 SPEM2Q0P670 501 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 RSPO4Q2I0M5 234 aaPredicted RBP13.61□□□□□ -0.23
TSC2-220ENST00000568238 GAB4Q2WGN9 574 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 SYT13Q7L8C5 426 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 DGLUCYQ7Z3D6 616 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 FAM114A1Q8IWE2 563 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 CAMKK1Q8N5S9 505 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 GAB3Q8WWW8 586 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 SLC35C1Q96A29 364 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 ZFRQ96KR1 1074 aaKnown RBP13.61□□□□□ -0.23
TSC2-220ENST00000568238 TWNKQ96RR1 684 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 NT5C1AQ9BXI3 368 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 DNAI2Q9GZS0 605 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 NACA2Q9H009 215 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 FBXO44Q9H4M3 255 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 DLL3Q9NYJ7 618 aa13.61□□□□□ -0.23
TSC2-220ENST00000568238 CHORDC1Q9UHD1 332 aaPredicted RBP13.61□□□□□ -0.23
TSC2-220ENST00000568238 CDV3Q9UKY7 258 aaKnown RBP13.61□□□□□ -0.23
TSC2-220ENST00000568238 E2F8A0AVK6 867 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 CILPO75339 1184 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 BEST1O76090 585 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 SDHBP21912 280 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 ZNF165P49910 485 aa13.6□□□□□ -0.23
TSC2-220ENST00000568238 MARSP56192 900 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms