RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 PKN3Q6P5Z2 889 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 PPM1KQ8N3J5 372 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 CPA6Q8N4T0 437 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 UBR7Q8N806 425 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 EZH1Q92800 747 aaPredicted RBP26.56■■□□□ 1.84
FANCA-228ENST00000567943 DUSP16Q9BY84 665 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 OSER1Q9NX31 292 aa26.56■■□□□ 1.84
FANCA-228ENST00000567943 MBL2P11226 248 aaPredicted RBP26.55■■□□□ 1.84
FANCA-228ENST00000567943 TUBP50607 506 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 ZC3H14Q6PJT7 736 aaKnown RBP26.55■■□□□ 1.84
FANCA-228ENST00000567943 KAT5Q92993 513 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 WBP2Q969T9 261 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 INTS2Q9H0H0 1204 aaKnown RBP26.55■■□□□ 1.84
FANCA-228ENST00000567943 SEMA4AQ9H3S1 761 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 FBXO44Q9H4M3 255 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 ZSCAN32Q9NX65 697 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 CFAP97Q9P2B7 532 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 SCML2Q9UQR0 700 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 PCDHGA2Q9Y5H1 932 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 DMXL1Q9Y485 3027 aa26.55■■□□□ 1.84
FANCA-228ENST00000567943 CYP26A1O43174 497 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 LILRB5O75023 590 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 EGFP01133 1207 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 MTIF2P46199 727 aaKnown RBP26.54■■□□□ 1.84
FANCA-228ENST00000567943 CCR3P51677 355 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 ARHGAP17Q68EM7 881 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 RRAGAQ7L523 313 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 ARHGEF19Q8IW93 802 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 ADGRG2Q8IZP9 1017 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 SYNPOQ8N3V7 929 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 KIAA1958Q8N8K9 716 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 SUMF1Q8NBK3 374 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 NMUR1Q9HB89 426 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 PNPLA8Q9NP80 782 aa26.54■■□□□ 1.84
FANCA-228ENST00000567943 K7ESF4 209 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 TBX18O95935 607 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 MBD3O95983 291 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 LMNAP02545 664 aaKnown RBP26.53■■□□□ 1.84
FANCA-228ENST00000567943 ACO1P21399 889 aaKnown RBP26.53■■□□□ 1.84
FANCA-228ENST00000567943 CXCL12P48061 93 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 KIF11P52732 1056 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 TMEM270Q6UE05 265 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 RBM43Q6ZSC3 357 aaKnown RBP26.53■■□□□ 1.84
FANCA-228ENST00000567943 P2RY13Q9BPV8 354 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 THAP9Q9H5L6 903 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 PCDHB4Q9Y5E5 795 aa26.53■■□□□ 1.84
FANCA-228ENST00000567943 PAPSS2O95340 614 aaPredicted RBP26.52■■□□□ 1.84
FANCA-228ENST00000567943 CYP17A1P05093 508 aa26.52■■□□□ 1.84
FANCA-228ENST00000567943 CD19P15391 556 aa26.52■■□□□ 1.84
FANCA-228ENST00000567943 DMWDQ09019 674 aa26.52■■□□□ 1.84
FANCA-228ENST00000567943 GRSF1Q12849 480 aaKnown RBP eCLIP26.52■■□□□ 1.84
FANCA-228ENST00000567943 CYLDQ9NQC7 956 aa26.52■■□□□ 1.84
FANCA-228ENST00000567943 TLR8Q9NR97 1041 aaKnown RBP26.52■■□□□ 1.84
FANCA-228ENST00000567943 USP3Q9Y6I4 520 aa26.52■■□□□ 1.84
FANCA-228ENST00000567943 DCHS1Q96JQ0 3298 aa26.52■■□□□ 1.84
FANCA-228ENST00000567943 TLR5O60602 858 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 NFATC1O95644 943 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 OPRD1P41143 372 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 AMPD2Q01433 879 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 GCNT1Q02742 428 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 GOLGA7BQ2TAP0 167 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 SGO2Q562F6 1265 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 HSP90AA4PQ58FG1 418 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 CT47A1Q5JQC4 288 aaPredicted RBP26.51■■□□□ 1.83
FANCA-228ENST00000567943 SCD5Q86SK9 330 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 TTC30AQ86WT1 665 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 FAM114A1Q8IWE2 563 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 CRACR2AQ9BSW2 395 aa26.51■■□□□ 1.83
FANCA-228ENST00000567943 FAM126AQ9BYI3 521 aaPredicted RBP26.51■■□□□ 1.83
FANCA-228ENST00000567943 A0A1W2PQH9 124 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 GREM1O60565 184 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 RHBDF2Q6PJF5 856 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 DDX42Q86XP3 938 aaKnown RBP eCLIP26.5■■□□□ 1.83
FANCA-228ENST00000567943 ANKRD52Q8NB46 1076 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 ATRIPQ8WXE1 791 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 CD101Q93033 1021 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 TSPAN16Q9UKR8 245 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 SPTBN4Q9H254 2564 aa26.5■■□□□ 1.83
FANCA-228ENST00000567943 E2F8A0AVK6 867 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 ANTXRLA6NF34 631 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 TULP2O00295 520 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 VDRP11473 427 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 DRD1P21728 446 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 NR1H3Q13133 447 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 DHCR24Q15392 516 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 CCDC186Q7Z3E2 898 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 KREMEN1Q96MU8 473 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 KLF16Q9BXK1 252 aaPredicted RBP26.49■■□□□ 1.83
FANCA-228ENST00000567943 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.49■■□□□ 1.83
FANCA-228ENST00000567943 POLR3BQ9NW08 1133 aaPredicted RBP26.49■■□□□ 1.83
FANCA-228ENST00000567943 NUDT5Q9UKK9 219 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 KIAA1257Q9ULG3 409 aa26.49■■□□□ 1.83
FANCA-228ENST00000567943 RNF225M0QZC1 329 aaPredicted RBP26.48■■□□□ 1.83
FANCA-228ENST00000567943 RNF40O75150 1001 aa26.48■■□□□ 1.83
FANCA-228ENST00000567943 PAEPP09466 180 aa26.48■■□□□ 1.83
FANCA-228ENST00000567943 SLC8A3P57103 927 aa26.48■■□□□ 1.83
FANCA-228ENST00000567943 MESP2Q0VG99 397 aa26.48■■□□□ 1.83
FANCA-228ENST00000567943 MAN2A1Q16706 1144 aa26.48■■□□□ 1.83
FANCA-228ENST00000567943 RAB41Q5JT25 222 aa26.48■■□□□ 1.83
FANCA-228ENST00000567943 CCDC183Q5T5S1 534 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms