RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CKAP4Q07065 602 aaKnown RBP20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 ADIGQ0VDE8 80 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 HYAL1Q12794 435 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 PSMD5Q16401 504 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 SLC8B1Q6J4K2 584 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 CEP112Q8N8E3 955 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 RIN2Q8WYP3 895 aaPredicted RBP20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 B3GALT6Q96L58 329 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 VN1R3Q9BXE9 311 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 TRIM7Q9C029 511 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 PACSIN2Q9UNF0 486 aaPredicted RBP20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 SSX2IPQ9Y2D8 614 aa20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.01■□□□□ 0.79
CSPG4P13-201ENST00000565545 C19orf67A6NJJ6 358 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 PIK3R2O00459 728 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 DPYSL4O14531 572 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 RIOK3O14730 519 aaKnown RBP20■□□□□ 0.79
CSPG4P13-201ENST00000565545 DDX3YO15523 660 aaKnown RBP20■□□□□ 0.79
CSPG4P13-201ENST00000565545 OR4Q2P0C623 313 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 CPB1P15086 417 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 GPD1P21695 349 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 PSMA2P25787 234 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 GRIK1P39086 918 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 TKTL1P51854 596 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 ZNF143P52747 638 aaPredicted RBP20■□□□□ 0.79
CSPG4P13-201ENST00000565545 CREMQ03060 361 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 MNS1Q8NEH6 495 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 JOSD2Q8TAC2 188 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 IRGQQ8WZA9 623 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 C8orf48Q96LL4 319 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 KCNK16Q96T55 309 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 CARD9Q9H257 536 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 PCDHA3Q9Y5H8 950 aa20■□□□□ 0.79
CSPG4P13-201ENST00000565545 C2CD4BA6NLJ0 364 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 KCNK3O14649 394 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 PSTPIP1O43586 416 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 HSF2BPO75031 334 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 SLU7O95391 586 aaKnown RBP19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 URODP06132 367 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 CYP2F1P24903 491 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 IRS1P35568 1242 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 CACNA2D1P54289 1103 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 OGDHQ02218 1023 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 DLX2Q07687 328 aaPredicted RBP19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 ADCY1Q08828 1119 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 CTC1Q2NKJ3 1217 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 LRRC38Q5VT99 294 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 PRSS55Q6UWB4 352 aaPredicted RBP19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 RHOT1Q8IXI2 618 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 CEP295NLQ96MC4 621 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 CNPY3Q9BT09 278 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 ALG13Q9NP73 1137 aaKnown RBP19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 ABI2Q9NYB9 513 aaPredicted RBP19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 HSFX1Q9UBD0 423 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 MYO7AQ13402 2215 aa19.99■□□□□ 0.79
CSPG4P13-201ENST00000565545 MTMR11A4FU01 709 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 SRGAP2O75044 1071 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 RNF8O76064 485 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 LINC00271P0C7V0 271 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 PDGFRAP16234 1089 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 PAFAH1B1P43034 410 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 PEX5P50542 639 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 TERF1P54274 439 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 DAOAP59103 153 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 ZNF252P-AS1Q0IIN9 211 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 SMAD2Q15796 467 aaKnown RBP19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 TPGS2Q68CL5 300 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 PM20D1Q6GTS8 502 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 CC2D1AQ6P1N0 951 aaPredicted RBP19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 CREG2Q8IUH2 290 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 RXFP2Q8WXD0 754 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 PPP2R3CQ969Q6 453 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 RPGRIP1Q96KN7 1286 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 TRIM62Q9BVG3 475 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 PLVAPQ9BX97 442 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 RHOBTB2Q9BYZ6 727 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 TMEM30AQ9NV96 361 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 COMMD8Q9NX08 183 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 MAFFQ9ULX9 164 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 CDY1Q9Y6F8 540 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 USP3Q9Y6I4 520 aa19.98■□□□□ 0.79
CSPG4P13-201ENST00000565545 F8VP50 259 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 MBTPS2O43462 519 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 DAB1O75553 588 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 FGF18O76093 207 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 ZBED1O96006 694 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 SDC4P31431 198 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 GTF2F1P35269 517 aaKnown RBP eCLIP19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 PCK1P35558 622 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 PTPN9P43378 593 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 ARPP19P56211 112 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 RWDD2BP57060 319 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 RNASE9P60153 205 aaKnown RBP19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 YWHAZP63104 245 aaKnown RBP19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 TUBB4BP68371 445 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 SMAD4Q13485 552 aaKnown RBP19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 HADHQ16836 314 aaKnown RBP19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 CCDC181Q5TID7 509 aa19.97■□□□□ 0.79
CSPG4P13-201ENST00000565545 RSPO2Q6UXX9 243 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms