RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 HCN2Q9UL51 889 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 ARID2Q68CP9 1835 aa9.66□□□□□ -0.86
VPS9D1-205ENST00000565452 PTPRDP23468 1912 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 LAD1O00515 517 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 SCAMP3O14828 347 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 HUS1O60921 280 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 OR52Z1P0C646 297 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 MAPTP10636 758 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 MBL2P11226 248 aaPredicted RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 ACADMP11310 421 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 GP1BBP13224 206 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 PLS3P13797 630 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 CDC25AP30304 524 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 GRIK1P39086 918 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 PNPLA4P41247 253 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 MAGEA11P43364 429 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 LIG4P49917 911 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 VAC14Q08AM6 782 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 ORC1Q13415 861 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 ECM1Q16610 540 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 INTS6LQ5JSJ4 861 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 HES3Q5TGS1 186 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 RINT1Q6NUQ1 792 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 VSTM1Q6UX27 236 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 C4orf50Q6ZRC1 276 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 DENND5BQ6ZUT9 1274 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 ERICH1Q86X53 443 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 TMEM86AQ8N2M4 240 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 TTC9Q92623 222 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 GTF3C6Q969F1 213 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 NAF1Q96HR8 494 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 ZFRQ96KR1 1074 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 LARP6Q9BRS8 491 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 CPNE5Q9HCH3 593 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 OSGEPQ9NPF4 335 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 CD93Q9NPY3 652 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 SPHK2Q9NRA0 654 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 DDX43Q9NXZ2 648 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 USP36Q9P275 1121 aaKnown RBP9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 LRWD1Q9UFC0 647 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 SH3BP1Q9Y3L3 701 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 RAD54BQ9Y620 910 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 CABIN1Q9Y6J0 2220 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 PTPN13Q12923 2485 aa9.65□□□□□ -0.86
VPS9D1-205ENST00000565452 KNL1Q8NG31 2342 aa9.65□□□□□ -0.87
VPS9D1-205ENST00000565452 ATMQ13315 3056 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 COL12A1Q99715 3063 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 H0Y8X5 98 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 PAPSS1O43252 624 aaPredicted RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 SCP2P22307 547 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 GLDCP23378 1020 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 ANXA13P27216 316 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 PCSK1P29120 753 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 LHX1P48742 406 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 TPMTP51580 245 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 PCBP4P57723 403 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 HMGN5P82970 282 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 ILKQ13418 452 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 E2F5Q15329 346 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 TDRD10Q5VZ19 366 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 FBXL19Q6PCT2 694 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 C1orf186Q6ZWK4 172 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 TMEM25Q86YD3 366 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 TMPRSS6Q8IU80 811 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 LSMEM2Q8N112 164 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 PDCL2Q8N4E4 241 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 SNRNP27Q8WVK2 155 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 SNX19Q92543 992 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 PRCCQ92733 491 aaPredicted RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 SIPA1Q96FS4 1042 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 CNDP2Q96KP4 475 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 ZNF578Q96N58 590 aaPredicted RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 MSTO1Q9BUK6 570 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 DPH1Q9BZG8 443 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 DNAJC17Q9NVM6 304 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 WDR35Q9P2L0 1181 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 ANKMY1Q9P2S6 941 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 ORC3Q9UBD5 711 aaPredicted RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 SEPT3Q9UH03 358 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 CPSF3Q9UKF6 684 aaKnown RBP9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 C2CD2Q9Y426 696 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
VPS9D1-205ENST00000565452 NOTCH2Q04721 2471 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ZNF638Q14966 1978 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 PLXND1Q9Y4D7 1925 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 A0A0B4J269 797 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 KCNJ18B7U540 433 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 WASH3PC4AMC7 463 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 E9PMD0 336 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 WNT7AO00755 349 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 HNRNPDLO14979 420 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 TRIM66O15016 1216 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 NPC1O15118 1278 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 TRIM24O15164 1050 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 FAM189A1O60320 539 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 SYNCRIPO60506 623 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 OLFM2O95897 454 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 OAS1P00973 400 aaKnown RBP9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 ITGAVP06756 1048 aa9.63□□□□□ -0.87
VPS9D1-205ENST00000565452 PDIA4P13667 645 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms