RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZSWIM8A7E2V4 1837 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 A8MX80 341 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TRDMT1O14717 391 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 USP12O75317 370 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CNMDO75829 334 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RARBP10826 455 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ARSAP15289 507 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CHRNB2P17787 502 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 COMTP21964 271 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ITGA9Q13797 1035 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ATG16L1Q676U5 607 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 UGT3A1Q6NUS8 523 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 FKBP9P1Q75LS8 142 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 GMCL1P1Q8NEA9 526 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 FBXO41Q8TF61 875 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 DCAF4Q8WV16 495 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 CCT6BQ92526 530 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SELENOSQ9BQE4 189 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 GANQ9H2C0 597 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 AASDHPPTQ9NRN7 309 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 MTF2Q9Y483 593 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 A0A1W2PQ67 120 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 AGPSO00116 658 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RASA4O43374 803 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SPOPO43791 374 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 SAT1P21673 171 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PIK3CGP48736 1102 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PPP1R7Q15435 360 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZC3H12AQ5D1E8 599 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 C8orf74Q6P047 294 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ACOT1Q86TX2 421 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 TRIM59Q8IWR1 403 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 PDCD7Q8N8D1 485 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 EIF1ADQ8N9N8 165 aaKnown RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 TFAP2BQ92481 460 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 RMND5BQ96G75 393 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 C9orf72Q96LT7 481 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZIM3Q96PE6 472 aa3.49□□□□□ -1.85
CHD9-213ENST00000564845 ZNF395Q9H8N7 513 aaPredicted RBP3.49□□□□□ -1.85
CHD9-213ENST00000564845 TCRBV7S3A2A0A539 114 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 H3BUI4 141 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 FZD9O00144 591 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GPR25O00155 361 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZNF197O14709 1029 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TBX3O15119 743 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TRPA1O75762 1119 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 EYA4O95677 639 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 HMBSP08397 361 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ESRRGP62508 458 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 EMC2Q15006 297 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TTMPQ5BVD1 217 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GKAP1Q5VSY0 366 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 CATSPERGQ6ZRH7 1159 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ZC3H3Q8IXZ2 948 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 SPOCK2Q92563 424 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SLC45A3Q96JT2 553 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 DIABLOQ9NR28 239 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CDC23Q9UJX2 597 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CORO2BQ9UQ03 480 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NOD1Q9Y239 953 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ANO9A1A5B4 782 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 E7ENQ6 273 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GSNP06396 782 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TGFB3P10600 412 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 RALBP11234 206 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TNFAIP3P21580 790 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CCND3P30281 292 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 PSMD7P51665 324 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GDF10P55107 478 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NOMO3P69849 1222 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 IFI35P80217 286 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 NOMO1Q15155 1222 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SPATS1Q496A3 300 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NOMO2Q5JPE7 1267 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 MOXD1Q6UVY6 613 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 LZICQ8WZA0 190 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 MMP19Q99542 508 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CCT7Q99832 543 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NDUFA13Q9P0J0 144 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CDH22Q9UJ99 828 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SRRM3A6NNA2 597 aaPredicted RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 ASAP2O43150 1006 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SLC25A27O95847 323 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 CCND2P30279 289 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GRIA1P42261 906 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 GPD2P43304 727 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 FKBP1AP62942 108 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 ANO4Q32M45 955 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 MIS18BP1Q6P0N0 1132 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 TNIP3Q96KP6 325 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 NT5C1BQ96P26 610 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 APOL2Q9BQE5 337 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 SLC2A11Q9BYW1 496 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 PTPRHQ9HD43 1115 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 C1orf112Q9NSG2 853 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 FEM1BQ9UK73 627 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 KIF1CO43896 1103 aaKnown RBP3.48□□□□□ -1.85
CHD9-213ENST00000564845 TTC4O95801 387 aa3.48□□□□□ -1.85
CHD9-213ENST00000564845 ITGAXP20702 1163 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms