RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 TTC30AQ86WT1 665 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 STT3BQ8TCJ2 826 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 MLST8Q9BVC4 326 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 ALG8Q9BVK2 526 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 KLC4Q9NSK0 619 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 GPR52Q9Y2T5 361 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 ADGRA2Q96PE1 1338 aa5.45□□□□□ -1.54
LINC00560-201ENST00000564593 J3KTA2 159 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 PSMD9O00233 223 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 IPO5O00410 1097 aaKnown RBP5.44□□□□□ -1.54
LINC00560-201ENST00000564593 EXOC5O00471 708 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 PCDH17O14917 1159 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 FESP07332 822 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 ANXA6P08133 673 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 CHRM2P08172 466 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 GYS1P13807 737 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 HSD3B1P14060 373 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 LIPAP38571 399 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 CLCN2P51788 898 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 FHL3Q13643 280 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 PTPAQ15257 358 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 LSM12Q3MHD2 195 aaKnown RBP5.44□□□□□ -1.54
LINC00560-201ENST00000564593 TREML2Q5T2D2 321 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 SPRED1Q7Z699 444 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 CCDC117Q8IWD4 279 aaPredicted RBP5.44□□□□□ -1.54
LINC00560-201ENST00000564593 LCORLQ8N3X6 602 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 SUN3Q8TAQ9 357 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 XAGE5Q8WWM1 108 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 RUBCNQ92622 972 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 R3HDM4Q96D70 268 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 HAPLN3Q96S86 360 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 FAM167BQ9BTA0 163 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 TP63Q9H3D4 680 aaPredicted RBP5.44□□□□□ -1.54
LINC00560-201ENST00000564593 EHD3Q9NZN3 535 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 DKK3Q9UBP4 350 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 RIMKLBQ9ULI2 386 aa5.44□□□□□ -1.54
LINC00560-201ENST00000564593 COL15A1P39059 1388 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 PNMA6EA0A0J9YXQ4 647 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 VWC2LB2RUY7 222 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 ACTL6BO94805 426 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 CD19P15391 556 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 PTPRRQ15256 657 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 TAF5Q15542 800 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 MIIPQ5JXC2 388 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 ZNF618Q5T7W0 954 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 TANGO2Q6ICL3 276 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 RINT1Q6NUQ1 792 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 RFX8Q6ZV50 586 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 RAB11FIP4Q86YS3 637 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 ANKRD18AQ8IVF6 992 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 NRSN1Q8IZ57 195 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 SUPT20HQ8NEM7 779 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 OR1N1Q8NGS0 311 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 OTUD7AQ8TE49 926 aaPredicted RBP5.43□□□□□ -1.54
LINC00560-201ENST00000564593 SOCS4Q8WXH5 440 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 DPCDQ9BVM2 203 aaPredicted RBP5.43□□□□□ -1.54
LINC00560-201ENST00000564593 ITM2CQ9NQX7 267 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 NKX1-2Q9UD57 310 aaPredicted RBP5.43□□□□□ -1.54
LINC00560-201ENST00000564593 STEAP1Q9UHE8 339 aa5.43□□□□□ -1.54
LINC00560-201ENST00000564593 M0R3H8 397 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 MPPED1O15442 326 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 IL6RP08887 468 aaPredicted RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 PAX3P23760 479 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 KLRK1P26718 216 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 AKT1P31749 480 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 ZEB1P37275 1124 aaPredicted RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 FOLR3P41439 243 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 ARL4CP56559 192 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 AP2B1P63010 937 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 BLOC1S1P78537 153 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 ZXDAP98168 799 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 GRM4Q14833 912 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 CLCA4Q14CN2 919 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 ATPAF1Q5TC12 328 aaPredicted RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 FNDC7Q5VTL7 733 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 METTL25Q8N6Q8 603 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 TFAP2BQ92481 460 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 EVI5LQ96CN4 794 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 GCC1Q96CN9 775 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 WDR24Q96S15 920 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 RTKNQ9BST9 563 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 MLXIPQ9HAP2 919 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 LPAR3Q9UBY5 353 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 CCNL1Q9UK58 526 aaPredicted RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 HMX3A6NHT5 357 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 C1QTNF3-AMACRE9PGA6 284 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 IRAK2O43187 625 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 NXPH3O95157 252 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 ONECUT2O95948 504 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 NR2F6P10588 404 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 TNFRSF1AP19438 455 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 HTR7P34969 479 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 PDE1AP54750 535 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 BMPR2Q13873 1038 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 ACOX1Q15067 660 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 P3H1Q32P28 736 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 Q6ZNX1 250 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 SUGP1Q8IWZ8 645 aaKnown RBP5.42□□□□□ -1.54
LINC00560-201ENST00000564593 SLC44A3Q8N4M1 653 aa5.42□□□□□ -1.54
LINC00560-201ENST00000564593 WDR60Q8WVS4 1066 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms