RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 TAF6P49848 677 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
CCNF-204ENST00000564333 GAD2Q05329 585 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 SV2CQ496J9 727 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 BOLA3Q53S33 107 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 ZC3H12AQ5D1E8 599 aaKnown RBP17.25■□□□□ 0.35
CCNF-204ENST00000564333 XKR4Q5GH76 650 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 DARS2Q6PI48 645 aaKnown RBP17.25■□□□□ 0.35
CCNF-204ENST00000564333 ZC3H18Q86VM9 953 aaKnown RBP17.25■□□□□ 0.35
CCNF-204ENST00000564333 RASAL3Q86YV0 1011 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 ANKMY2Q8IV38 441 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 TAB3Q8N5C8 712 aaPredicted RBP17.25■□□□□ 0.35
CCNF-204ENST00000564333 C7orf31Q8N865 590 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 GIMAP7Q8NHV1 300 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 KHSRPQ92945 711 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCNF-204ENST00000564333 TBCBQ99426 244 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 SNRNP25Q9BV90 132 aaKnown RBP17.25■□□□□ 0.35
CCNF-204ENST00000564333 B3GNT5Q9BYG0 378 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 SNX25Q9H3E2 840 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 GDAP2Q9NXN4 497 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 IPPQ9Y573 584 aa17.25■□□□□ 0.35
CCNF-204ENST00000564333 RASA4BC9J798 803 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 POC1B-GALNT4F8VUJ3 575 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 SMAPO00193 183 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 RASA4O43374 803 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 SUN1O94901 812 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 RGS2P41220 211 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 CRYBB1P53674 252 aaPredicted RBP17.24■□□□□ 0.35
CCNF-204ENST00000564333 NR1H3Q13133 447 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 FNBP1LQ5T0N5 605 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 C1orf228Q6PIY5 440 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 CCDC63Q8NA47 563 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 MAML1Q92585 1016 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 APBA2Q99767 749 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 PPCSQ9HAB8 311 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 GOLGA2P5Q9HBQ8 144 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 PCDH18Q9HCL0 1135 aa17.24■□□□□ 0.35
CCNF-204ENST00000564333 TCRBV7S3A2A0A539 114 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 E7ESA3 106 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 H7C0C1 242 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 APOL1O14791 398 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 MDM4O15151 490 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 PDGFRBP09619 1106 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 TGM2P21980 687 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 GNL1P36915 607 aaPredicted RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 ATP5OP48047 213 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 SOX4Q06945 474 aaPredicted RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 CST9Q5W186 159 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 CRYBG2Q8N1P7 616 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 ANKRD52Q8NB46 1076 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 ATP11CQ8NB49 1132 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 APPL2Q8NEU8 664 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 CLEC4CQ8WTT0 213 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 DNAI2Q9GZS0 605 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 CD248Q9HCU0 757 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 MLXIPLQ9NP71 852 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 NKIRAS1Q9NYS0 192 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 XPO7Q9UIA9 1087 aaKnown RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 Q9Y3F1 56 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 USP15Q9Y4E8 981 aaPredicted RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 CLUHO75153 1309 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 SNX3O60493 162 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 LMO2P25791 158 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 PHBP35232 272 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 PTPN9P43378 593 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 HDAC4P56524 1084 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 GPX6P59796 221 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 RNASELQ05823 741 aaKnown RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 MPP2Q14168 576 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 FSCN1Q16658 493 aaKnown RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 CA9Q16790 459 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 MSS51Q4VC12 460 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 ZNF618Q5T7W0 954 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 ARHGEF18Q6ZSZ5 1173 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 SLC26A9Q7LBE3 791 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 TRABD2AQ86V40 505 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 VSIG1Q86XK7 387 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 ADGRF2Q8IZF7 708 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 PYROXD1Q8WU10 500 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 ELAC2Q9BQ52 826 aaKnown RBP17.23■□□□□ 0.35
CCNF-204ENST00000564333 ZNF670Q9BS34 389 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 UBN1Q9NPG3 1134 aa17.23■□□□□ 0.35
CCNF-204ENST00000564333 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.22■□□□□ 0.35
CCNF-204ENST00000564333 MANSC4A6NHS7 340 aaPredicted RBP17.22■□□□□ 0.35
CCNF-204ENST00000564333 GNAT1P11488 350 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 LCP1P13796 627 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 HOXC8P31273 242 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 STIP1P31948 543 aaKnown RBP17.22■□□□□ 0.35
CCNF-204ENST00000564333 SCNN1AP37088 669 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 NRLP54845 237 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 PQLC3Q8N755 202 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 PLD5Q8N7P1 536 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 SMG8Q8ND04 991 aaKnown RBP17.22■□□□□ 0.35
CCNF-204ENST00000564333 GDAP1Q8TB36 358 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 CKAP2Q8WWK9 683 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 WDR83Q9BRX9 315 aaKnown RBP17.22■□□□□ 0.35
CCNF-204ENST00000564333 CYLDQ9NQC7 956 aa17.22■□□□□ 0.35
CCNF-204ENST00000564333 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms