RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 GOLGA1Q92805 767 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 DNASE1L2Q92874 299 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 NECAB3Q96P71 396 aaPredicted RBP17.54■□□□□ 0.4
RNF40-206ENST00000564260 ABCC13Q9NSE7 274 aa17.54■□□□□ 0.4
RNF40-206ENST00000564260 THG1LQ9NWX6 298 aaKnown RBP17.54■□□□□ 0.4
RNF40-206ENST00000564260 NOCTQ9UK39 431 aaKnown RBP17.54■□□□□ 0.4
RNF40-206ENST00000564260 BZW2Q9Y6E2 419 aaKnown RBP17.54■□□□□ 0.4
RNF40-206ENST00000564260 PI4K2BG5E9Z4 385 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 TLR5O60602 858 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 TPM1P09493 284 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 ATP5C1P36542 298 aaKnown RBP17.53■□□□□ 0.4
RNF40-206ENST00000564260 SCNN1AP37088 669 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 PRKCIP41743 596 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 DAOAP59103 153 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 ZBED6P86452 979 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 IFRD2Q12894 506 aaPredicted RBP17.53■□□□□ 0.4
RNF40-206ENST00000564260 ARHGAP29Q52LW3 1261 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 STXBP5Q5T5C0 1151 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 TANGO2Q6ICL3 276 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 DENND1BQ6P3S1 775 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 C1orf228Q6PIY5 440 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 NOP9Q86U38 636 aaKnown RBP17.53■□□□□ 0.4
RNF40-206ENST00000564260 BPIFB1Q8TDL5 484 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 IRF7Q92985 503 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 MSANTD3Q96H12 275 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 TRMT61BQ9BVS5 477 aaKnown RBP17.53■□□□□ 0.4
RNF40-206ENST00000564260 ULBP1Q9BZM6 244 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 TRPC7Q9HCX4 862 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 ACP6Q9NPH0 428 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.53■□□□□ 0.4
RNF40-206ENST00000564260 ASNSD1Q9NWL6 643 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 CHORDC1Q9UHD1 332 aaPredicted RBP17.53■□□□□ 0.4
RNF40-206ENST00000564260 NAGPAQ9UK23 515 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 CAPN11Q9UMQ6 739 aa17.53■□□□□ 0.4
RNF40-206ENST00000564260 C2orf78A6NCI8 922 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 HEPACAM2A8MVW5 462 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 TULP2O00295 520 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 NRG2O14511 850 aaPredicted RBP17.52■□□□□ 0.4
RNF40-206ENST00000564260 CHADO15335 359 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 PNMA6AP0CW24 399 aaPredicted RBP17.52■□□□□ 0.4
RNF40-206ENST00000564260 YWHAGP61981 247 aaKnown RBP eCLIP17.52■□□□□ 0.4
RNF40-206ENST00000564260 USP4Q13107 963 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 SFMBT2Q5VUG0 894 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 POTEHQ6S545 545 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 TOGARAM2Q6ZUX3 1019 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 EDAQ92838 391 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 USP13Q92995 863 aaPredicted RBP17.52■□□□□ 0.4
RNF40-206ENST00000564260 PPP1R13BQ96KQ4 1090 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 ST7Q9NRC1 585 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 WNT16Q9UBV4 365 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 DNMT3LQ9UJW3 386 aa17.52■□□□□ 0.4
RNF40-206ENST00000564260 LUC7L2Q9Y383 392 aaKnown RBP17.52■□□□□ 0.4
RNF40-206ENST00000564260 A0A1W2PQH9 124 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 LRRC53A6NM62 1247 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 SLC9A3R1O14745 358 aaPredicted RBP17.51■□□□□ 0.39
RNF40-206ENST00000564260 COCHO43405 550 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 PRAMEF12O95522 483 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 ABL1P00519 1130 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
RNF40-206ENST00000564260 RARGP13631 454 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 GLULP15104 373 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 GABRB2P47870 512 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 KPNA1P52294 538 aaPredicted RBP17.51■□□□□ 0.39
RNF40-206ENST00000564260 COG7P83436 770 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 ZXDAP98168 799 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 EFHC1Q5JVL4 640 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 VITQ6UXI7 678 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 IRF2BP2Q7Z5L9 587 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 SCD5Q86SK9 330 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 YAF2Q8IY57 180 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 DRC7Q8IY82 874 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 WDTC1Q8N5D0 677 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 ARL14EPQ8N8R7 260 aaPredicted RBP17.51■□□□□ 0.39
RNF40-206ENST00000564260 NUP210Q8TEM1 1887 aaPredicted RBP17.51■□□□□ 0.39
RNF40-206ENST00000564260 OTUB2Q96DC9 234 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 NACA2Q9H009 215 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 MUTYHQ9UIF7 546 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 STRIP2Q9ULQ0 834 aa17.51■□□□□ 0.39
RNF40-206ENST00000564260 TCF20Q9UGU0 1960 aaKnown RBP17.51■□□□□ 0.39
RNF40-206ENST00000564260 E2F8A0AVK6 867 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 ASGR2P07307 311 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 LCP1P13796 627 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 NOMO3P69849 1222 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 FMO1Q01740 532 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 SIGLEC14Q08ET2 396 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 NNTQ13423 1086 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 ARID5BQ14865 1188 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 PDGFRLQ15198 375 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 ZNF77Q15935 545 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 ASIC2Q16515 512 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 BSPRYQ5W0U4 402 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 BTBD8Q5XKL5 378 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 CC2D1AQ6P1N0 951 aaPredicted RBP17.5■□□□□ 0.39
RNF40-206ENST00000564260 ARCQ7LC44 396 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 BHLHA9Q7RTU4 235 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 VSTM4Q8IW00 320 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 NMUR1Q9HB89 426 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 TBC1D14Q9P2M4 693 aa17.5■□□□□ 0.39
RNF40-206ENST00000564260 DOCK6Q96HP0 2047 aa17.49■□□□□ 0.39
RNF40-206ENST00000564260 E5RJQ4 531 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms