RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 TUBP50607 506 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 SLC5A3P53794 718 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 C10orf76Q5T2E6 689 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 SCARA5Q6ZMJ2 495 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 C12orf56Q8IXR9 622 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 SCAMP5Q8TAC9 235 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 XYLT2Q9H1B5 865 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 CCSER2Q9H7U1 834 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 ZDHHC4Q9NPG8 344 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 SPHK2Q9NRA0 654 aa22.14■■□□□ 1.13
HERC2-204ENST00000563945 MYOFQ9NZM1 2061 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 PVALEFA0A1B0GWK0 134 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 AP5Z1O43299 807 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 IRF1P10914 325 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 AFMP43652 599 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 MAPK8P45983 427 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 GOLGA8FQ08AF8 430 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 GOLGA8DPQ0D2H9 430 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 MESP2Q0VG99 397 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 NCOA4Q13772 614 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 SNX30Q5VWJ9 437 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 SHC4Q6S5L8 630 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 SLC36A4Q6YBV0 504 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 FBXO44Q9H4M3 255 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 VRTNQ9H8Y1 702 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 GMIPQ9P107 970 aa22.13■■□□□ 1.13
HERC2-204ENST00000563945 GON4LQ3T8J9 2241 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 K7ELQ4 463 aaPredicted RBP22.12■■□□□ 1.13
HERC2-204ENST00000563945 HOXC11O43248 304 aaPredicted RBP22.12■■□□□ 1.13
HERC2-204ENST00000563945 TULP3O75386 442 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 CFIP05156 583 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 PTGER3P43115 390 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 CASP4P49662 377 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 UNQ6494/PRO21346Q6UXR6 183 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 ACOT1Q86TX2 421 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 BBS7Q8IWZ6 715 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 CEP57L1Q8IYX8 460 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 DEFB124Q8NES8 71 aa22.12■■□□□ 1.13
HERC2-204ENST00000563945 XPO6Q96QU8 1125 aaKnown RBP22.12■■□□□ 1.13
HERC2-204ENST00000563945 TLR8Q9NR97 1041 aaKnown RBP22.12■■□□□ 1.13
HERC2-204ENST00000563945 ADAM23O75077 832 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 ENGP17813 658 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 CASP1P29466 404 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 NTSR1P30989 418 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 RPL6Q02878 288 aaKnown RBP22.11■■□□□ 1.13
HERC2-204ENST00000563945 BMT2Q1RMZ1 405 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 SGSM1Q2NKQ1 1148 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 MAP7D1Q3KQU3 841 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 FOXD4L5Q5VV16 416 aaPredicted RBP22.11■■□□□ 1.13
HERC2-204ENST00000563945 GRAMD4Q6IC98 578 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 TMEM25Q86YD3 366 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 HDDC3Q8N4P3 179 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 FRMD1Q8N878 549 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 CEP76Q8TAP6 659 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 FOXD4L4Q8WXT5 416 aaPredicted RBP22.11■■□□□ 1.13
HERC2-204ENST00000563945 KRT82Q9NSB4 513 aa22.11■■□□□ 1.13
HERC2-204ENST00000563945 MBD1Q9UIS9 605 aaPredicted RBP22.11■■□□□ 1.13
HERC2-204ENST00000563945 LSM7Q9UK45 103 aaKnown RBP22.11■■□□□ 1.13
HERC2-204ENST00000563945 C1QTNF9BB2RNN3 333 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 TLR5O60602 858 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 C1QTNF9P0C862 333 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 HOXB2P14652 356 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 RDXP35241 583 aaKnown RBP22.1■■□□□ 1.13
HERC2-204ENST00000563945 HOXD12P35452 270 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 WASP42768 502 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 ME1P48163 572 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 GFPT1Q06210 699 aaPredicted RBP22.1■■□□□ 1.13
HERC2-204ENST00000563945 EHHADHQ08426 723 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 DUOXA1Q1HG43 343 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 SLC23A3Q6PIS1 610 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 PAQR9Q6ZVX9 377 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 RABEPKQ7Z6M1 372 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 ETFBKMTQ8IXQ9 262 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 TERB1Q8NA31 727 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 PARD3BQ8TEW8 1205 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 ZFRQ96KR1 1074 aaKnown RBP22.1■■□□□ 1.13
HERC2-204ENST00000563945 GTPBP2Q9BX10 602 aaKnown RBP22.1■■□□□ 1.13
HERC2-204ENST00000563945 TMEM74BQ9NUR3 256 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 DNAJC17Q9NVM6 304 aaKnown RBP22.1■■□□□ 1.13
HERC2-204ENST00000563945 IL37Q9NZH6 218 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 WDR35Q9P2L0 1181 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 SLC6A14Q9UN76 642 aa22.1■■□□□ 1.13
HERC2-204ENST00000563945 MYO18AQ92614 2054 aaKnown RBP22.1■■□□□ 1.13
HERC2-204ENST00000563945 LRRIQ3A6PVS8 624 aaPredicted RBP22.09■■□□□ 1.13
HERC2-204ENST00000563945 RPN1P04843 607 aaKnown RBP22.09■■□□□ 1.13
HERC2-204ENST00000563945 SPINK2P20155 84 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 ITPKAP23677 461 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 ATP5C1P36542 298 aaKnown RBP22.09■■□□□ 1.13
HERC2-204ENST00000563945 MAP3K7CLP57077 242 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 FOXD4L6Q3SYB3 417 aaPredicted RBP22.09■■□□□ 1.13
HERC2-204ENST00000563945 FOXD4L3Q6VB84 417 aaPredicted RBP22.09■■□□□ 1.13
HERC2-204ENST00000563945 CHPFQ8IZ52 775 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 FUKQ8N0W3 1084 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 PHTF2Q8N3S3 785 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 DEFB119Q8N690 84 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 SLC2A14Q8TDB8 520 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 DUSP9Q99956 384 aaKnown RBP22.09■■□□□ 1.13
HERC2-204ENST00000563945 BBS2Q9BXC9 721 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 ADAM33Q9BZ11 813 aa22.09■■□□□ 1.13
HERC2-204ENST00000563945 DNAI2Q9GZS0 605 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms