RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CCDC186Q7Z3E2 898 aa29.81■■■□□ 2.36
NME3-203ENST00000563367 SCD5Q86SK9 330 aa29.81■■■□□ 2.36
NME3-203ENST00000563367 IRF2BPLQ9H1B7 796 aa29.81■■■□□ 2.36
NME3-203ENST00000563367 MAGEA9P43362 315 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 BCAT1P54687 386 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 PKDCCQ504Y2 493 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 MAML2Q8IZL2 1156 aaPredicted RBP29.8■■■□□ 2.36
NME3-203ENST00000563367 ATP2A3Q93084 1043 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 CYLDQ9NQC7 956 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 SPATA6Q9NWH7 488 aaPredicted RBP29.8■■■□□ 2.36
NME3-203ENST00000563367 HESX1Q9UBX0 185 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 CNTN6Q9UQ52 1028 aa29.8■■■□□ 2.36
NME3-203ENST00000563367 GTPBP10A4D1E9 387 aaKnown RBP29.79■■■□□ 2.36
NME3-203ENST00000563367 XPO1O14980 1071 aaKnown RBP29.79■■■□□ 2.36
NME3-203ENST00000563367 BRD2P25440 801 aaKnown RBP29.79■■■□□ 2.36
NME3-203ENST00000563367 GJA4P35212 333 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 BST2Q10589 180 aaKnown RBP29.79■■■□□ 2.36
NME3-203ENST00000563367 MIIPQ5JXC2 388 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 LCLAT1Q6UWP7 414 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 CPA6Q8N4T0 437 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 WBP2Q969T9 261 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 TUBGCP2Q9BSJ2 902 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 CHRDQ9H2X0 955 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 RBM12Q9NTZ6 932 aaKnown RBP29.79■■■□□ 2.36
NME3-203ENST00000563367 NUDT5Q9UKK9 219 aa29.79■■■□□ 2.36
NME3-203ENST00000563367 PON1P27169 355 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 SLC8A3P57103 927 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 EXOC3L4Q17RC7 722 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 VWA3BQ502W6 1294 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 CCDC183Q5T5S1 534 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 NAIF1Q69YI7 327 aaPredicted RBP29.78■■■□□ 2.36
NME3-203ENST00000563367 DDX42Q86XP3 938 aaKnown RBP eCLIP29.78■■■□□ 2.36
NME3-203ENST00000563367 KIAA1958Q8N8K9 716 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 ENOX1Q8TC92 643 aaKnown RBP29.78■■■□□ 2.36
NME3-203ENST00000563367 NACA2Q9H009 215 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.78■■■□□ 2.36
NME3-203ENST00000563367 NAGPAQ9UK23 515 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.78■■■□□ 2.36
NME3-203ENST00000563367 NFE2L3Q9Y4A8 694 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 FANCMQ8IYD8 2048 aa29.78■■■□□ 2.36
NME3-203ENST00000563367 KCNJ18B7U540 433 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 RARGP13631 454 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 TKTL1P51854 596 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 MTAPQ13126 283 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 KCNJ12Q14500 433 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 CNGA2Q16280 664 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 C11orf57Q6ZUT1 292 aaPredicted RBP29.77■■■□□ 2.36
NME3-203ENST00000563367 KLF16Q9BXK1 252 aaPredicted RBP29.77■■■□□ 2.36
NME3-203ENST00000563367 NDST4Q9H3R1 872 aa29.77■■■□□ 2.36
NME3-203ENST00000563367 MDM4O15151 490 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 KRT5P13647 590 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 PRKCSHP14314 528 aaPredicted RBP29.76■■■□□ 2.35
NME3-203ENST00000563367 ATP5C1P36542 298 aaKnown RBP29.76■■■□□ 2.35
NME3-203ENST00000563367 CCINQ13939 588 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 GAS6Q14393 721 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 SASS6Q6UVJ0 657 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 ADGRG2Q8IZP9 1017 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 NDRG1Q92597 394 aaKnown RBP29.76■■■□□ 2.35
NME3-203ENST00000563367 ULBP1Q9BZM6 244 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 FBRSL1Q9HCM7 1045 aaKnown RBP29.76■■■□□ 2.35
NME3-203ENST00000563367 SIX2Q9NPC8 291 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 TMEM63CQ9P1W3 806 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 APEX2Q9UBZ4 518 aa29.76■■■□□ 2.35
NME3-203ENST00000563367 VPS13AQ96RL7 3174 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 E2F8A0AVK6 867 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 TRDMT1O14717 391 aaKnown RBP29.75■■■□□ 2.35
NME3-203ENST00000563367 NFATC1O95644 943 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 SETSIPP0DME0 302 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 PLA2G4AP47712 749 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 PSEN1P49768 467 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 MFAP3P55082 362 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 TCP11X2Q5H9J9 407 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 TMEM196Q5HYL7 178 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 FSTL4Q6MZW2 842 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 ENOSF1Q7L5Y1 443 aa29.75■■■□□ 2.35
NME3-203ENST00000563367 AJAP1Q9UKB5 411 aaPredicted RBP29.75■■■□□ 2.35
NME3-203ENST00000563367 SLC9A3R1O14745 358 aaPredicted RBP29.74■■■□□ 2.35
NME3-203ENST00000563367 LAMTOR5O43504 91 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 GABBR2O75899 941 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 IRF1P10914 325 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 GALK1P51570 392 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 LRRC32Q14392 662 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 ARHGAP44Q17R89 818 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 GAB4Q2WGN9 574 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 DGKKQ5KSL6 1271 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 PM20D1Q6GTS8 502 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 Q6ZS52 159 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 BHLHA9Q7RTU4 235 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 SLC35F5Q8WV83 523 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 SECISBP2LQ93073 1101 aaKnown RBP29.74■■■□□ 2.35
NME3-203ENST00000563367 LRRC4Q9HBW1 653 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 ANO10Q9NW15 660 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 CLIC5Q9NZA1 410 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 SH3BP1Q9Y3L3 701 aa29.74■■■□□ 2.35
NME3-203ENST00000563367 BECN2A8MW95 431 aa29.73■■■□□ 2.35
NME3-203ENST00000563367 M0QYV0 167 aa29.73■■■□□ 2.35
NME3-203ENST00000563367 ZBED1O96006 694 aa29.73■■■□□ 2.35
NME3-203ENST00000563367 CYP17A1P05093 508 aa29.73■■■□□ 2.35
NME3-203ENST00000563367 SP9P0CG40 484 aa29.73■■■□□ 2.35
NME3-203ENST00000563367 AMPD2Q01433 879 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms