RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 CDKL5O76039 1030 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 GABRB3P28472 473 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 PTDSS1P48651 473 aaKnown RBP6.6□□□□□ -1.35
CHD9-205ENST00000562785 DGKEP52429 567 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 COPAP53621 1224 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 HSPA2P54652 639 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 ADAM17P78536 824 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 FPGSQ05932 587 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 MYO1EQ12965 1108 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 RESTQ13127 1097 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 PLAG1Q6DJT9 500 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 USP17L6PQ6QN14 398 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 CPEB3Q8NE35 698 aaKnown RBP6.6□□□□□ -1.35
CHD9-205ENST00000562785 BPIFB1Q8TDL5 484 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 SLC25A43Q8WUT9 341 aaPredicted RBP6.6□□□□□ -1.35
CHD9-205ENST00000562785 MYEOVQ96EZ4 313 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 CFAP53Q96M91 514 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 FAM83DQ9H4H8 585 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 UNKLQ9H9P5 680 aaKnown RBP6.6□□□□□ -1.35
CHD9-205ENST00000562785 DKK4Q9UBT3 224 aa6.6□□□□□ -1.35
CHD9-205ENST00000562785 MST1RQ04912 1400 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 SHPRHQ149N8 1683 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 A0A0B4J269 797 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 FAM234BA2RU67 622 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 TMEM200CA6NKL6 621 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 AQP7P3A6NL99 342 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 FFAR2O15552 330 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 NDUFA10O95299 355 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 PEX11BO96011 259 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 TPH1P17752 444 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 KCNA3P22001 575 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 DDX6P26196 483 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHD9-205ENST00000562785 CD6P30203 668 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 ALDH9A1P49189 494 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 ICA1Q05084 483 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 TUBB3Q13509 450 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 TRIM14Q14142 442 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 TUBB8Q3ZCM7 444 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 RBM20Q5T481 1227 aaKnown RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 SFRP4Q6FHJ7 346 aaPredicted RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 PGBD2Q6P3X8 592 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 RNF207Q6ZRF8 634 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 COLGALT2Q8IYK4 626 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 ZNF527Q8NB42 609 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 SMCR8Q8TEV9 937 aaPredicted RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 C18orf8Q96DM3 657 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 NELL2Q99435 816 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 CXorf36Q9H7Y0 433 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 PPCSQ9HAB8 311 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 NECTIN3Q9NQS3 549 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 INTS13Q9NVM9 706 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 SLC39A10Q9ULF5 831 aa6.59□□□□□ -1.35
CHD9-205ENST00000562785 NDRG4Q9ULP0 352 aaKnown RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 MAGED2Q9UNF1 606 aaPredicted RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 XIRP1Q702N8 1843 aaKnown RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 RGPD8O14715 1765 aaPredicted RBP6.59□□□□□ -1.35
CHD9-205ENST00000562785 C1orf167Q5SNV9 1468 aa6.59□□□□□ -1.36
CHD9-205ENST00000562785 SSH2Q76I76 1423 aa6.59□□□□□ -1.36
CHD9-205ENST00000562785 ACEP12821 1306 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 MED1Q15648 1581 aaPredicted RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 GOLGA6L3A6NEY3 463 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 F5H697 171 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 hCG_1984214I3L0E3 225 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 TRIAP1O43715 76 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 NDST3O95803 873 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 TYRP1P17643 537 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 LAG3P18627 525 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 PPP2R1AP30153 589 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 FSTL1Q12841 308 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 WDR43Q15061 677 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD9-205ENST00000562785 PUM3Q15397 648 aaKnown RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 ZNF750Q32MQ0 723 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 ANO1Q5XXA6 986 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 FBXO38Q6PIJ6 1188 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 KRTAP1-3Q8IUG1 177 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 CCDC150Q8NCX0 1101 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 NGDNQ8NEJ9 315 aaKnown RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 CACTINQ8WUQ7 758 aaKnown RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 AS3MTQ9HBK9 375 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 RGL1Q9NZL6 768 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 MRPS17Q9Y2R5 130 aaKnown RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 ABCC6O95255 1503 aa6.58□□□□□ -1.36
CHD9-205ENST00000562785 TRPM3Q9HCF6 1732 aaPredicted RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 PHRF1Q9P1Y6 1649 aaKnown RBP6.58□□□□□ -1.36
CHD9-205ENST00000562785 TRGV11A0A075B6L2 103 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 PODXLO00592 558 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 NBNO60934 754 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 PPFIA4O75335 1185 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 IDEP14735 1019 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 GATA3P23771 443 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 PDIA3P30101 505 aaKnown RBP6.57□□□□□ -1.36
CHD9-205ENST00000562785 BLMHQ13867 455 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 ZRSR2Q15696 482 aaKnown RBP6.57□□□□□ -1.36
CHD9-205ENST00000562785 NRN1LQ496H8 165 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 INO80DQ53TQ3 878 aaPredicted RBP6.57□□□□□ -1.36
CHD9-205ENST00000562785 ARHGAP40Q5TG30 622 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 VPS53Q5VIR6 699 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 CACHD1Q5VU97 1274 aa6.57□□□□□ -1.36
CHD9-205ENST00000562785 RGS7BPQ6MZT1 257 aaPredicted RBP6.57□□□□□ -1.36
CHD9-205ENST00000562785 KIAA0408Q6ZU52 694 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms