RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZC3H18Q86VM9 953 aaKnown RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 ZNF557Q8N988 423 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 EIF1ADQ8N9N8 165 aaKnown RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 PDZD8Q8NEN9 1154 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TMEM165Q9HC07 324 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 USP18Q9UMW8 372 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ZNF185O15231 689 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 TTI1O43156 1089 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PMLP29590 882 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 CD52P31358 61 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 PDCLQ13371 301 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 LINC00523Q86TU6 105 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 CFAP36Q96G28 342 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ROPN1BQ9BZX4 212 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 ROPN1Q9HAT0 212 aaPredicted RBP7.85□□□□□ -1.15
TCF4-216ENST00000562680 DKK3Q9UBP4 350 aa7.85□□□□□ -1.15
TCF4-216ENST00000562680 ANXA9O76027 345 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 SUN1O94901 812 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 NPR3P17342 541 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 TNFSF9P41273 254 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 SERPINB9P50453 376 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 OXCT1P55809 520 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 GJA9P57773 515 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 VSNL1P62760 191 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 AMHR2Q16671 573 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 FAM171A1Q5VUB5 890 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 NAPEPLDQ6IQ20 393 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 FAM117BQ6P1L5 589 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 RAPH1Q70E73 1250 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 NECAB2Q7Z6G3 386 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 KATNAL2Q8IYT4 538 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 FGFBP2Q9BYJ0 223 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 AP4E1Q9UPM8 1137 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 LAMA4Q16363 1823 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 CCDC160A6NGH7 325 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 TREHO43280 583 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 EOMESO95936 686 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 EPHB2P29323 1055 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 CORO7P57737 925 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 NOMO3P69849 1222 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 MFN1Q8IWA4 741 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 PPIL6Q8IXY8 311 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 KIRREL3Q8IZU9 778 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 LRRC43Q8N309 656 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 SLC2A14Q8TDB8 520 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 ZNF483Q8TF39 744 aaPredicted RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 DEFB118Q96PH6 123 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 EMILIN2Q9BXX0 1053 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 CREBZFQ9NS37 354 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 WHRNQ9P202 907 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 BAIAP2L1Q9UHR4 511 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 RAD51CO43502 376 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 CDH16O75309 829 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 FECHP22830 423 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 CCR1P32246 355 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 NOS2P35228 1153 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 ABL2P42684 1182 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 FMO1Q01740 532 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 POLNQ7Z5Q5 900 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 DEFB128Q7Z7B8 93 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 NT5DC3Q86UY8 548 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 ZC3H3Q8IXZ2 948 aaKnown RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 YAF2Q8IY57 180 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 FAM81AQ8TBF8 368 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 ALKBH8Q96BT7 664 aaKnown RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 MS4A14Q96JA4 679 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 SMYD3Q9H7B4 428 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 TTC7AQ9ULT0 858 aaPredicted RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 NOVA2Q9UNW9 492 aaKnown RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 LCA5LO95447 670 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 IMPDH2P12268 514 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 MAP3K7CLP57077 242 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 SPARCL1Q14515 664 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 TARBP2Q15633 366 aaKnown RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 C9orf57Q5W0N0 161 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 ATG16L1Q676U5 607 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 LRRC8DQ7L1W4 858 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 APLFQ8IW19 511 aaPredicted RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 NPLOC4Q8TAT6 608 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 TFB1MQ8WVM0 346 aaKnown RBP7.84□□□□□ -1.15
TCF4-216ENST00000562680 OSGEPQ9NPF4 335 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 RAB6BQ9NRW1 208 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 GTF2IRD1Q9UHL9 959 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 BCAP29Q9UHQ4 241 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 USP20Q9Y2K6 914 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 SQORQ9Y6N5 450 aa7.84□□□□□ -1.15
TCF4-216ENST00000562680 DNAJC25-GNG10A0A024R161 153 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 SMIM28A0A1B0GU29 152 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 F5H5T6 163 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 PIK3R2O00459 728 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ARIH2O95376 493 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 YWHAQP27348 245 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 NR2C2P49116 596 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 RPS6KA3P51812 740 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 B3GALNT2Q8NCR0 500 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 MGARPQ8TDB4 240 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 KAT5Q92993 513 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 TLR10Q9BXR5 811 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 POPDC2Q9HBU9 364 aa7.83□□□□□ -1.16
TCF4-216ENST00000562680 ITM2BQ9Y287 266 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms