RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 HARSP12081 509 aaKnown RBP19.37■□□□□ 0.69
BBS4-204ENST00000562084 MYL4P12829 197 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 TNNI1P19237 187 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 KRT76Q01546 638 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 DPYSL3Q14195 570 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 HSP90AA5PQ58FG0 334 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 STXBP5Q5T5C0 1151 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 NCAPG2Q86XI2 1143 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 KCNN1Q92952 543 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 Q9H521 79 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 TDRD3Q9H7E2 651 aaKnown RBP19.37■□□□□ 0.69
BBS4-204ENST00000562084 THAP1Q9NVV9 213 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 SMCHD1A6NHR9 2005 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 KBTBD13C9JR72 458 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 STRNO43815 780 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 CST8O60676 142 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 DKC1O60832 514 aaKnown RBP eCLIP19.37■□□□□ 0.69
BBS4-204ENST00000562084 GDF10P55107 478 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 YWHAGP61981 247 aaKnown RBP eCLIP19.37■□□□□ 0.69
BBS4-204ENST00000562084 PDK3Q15120 406 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 CHI3L2Q15782 390 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 MMEL1Q495T6 779 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 PGM2L1Q6PCE3 622 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 USP50Q70EL3 339 aaPredicted RBP19.37■□□□□ 0.69
BBS4-204ENST00000562084 MCF2L2Q86YR7 1114 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 WDR75Q8IWA0 830 aaKnown RBP19.37■□□□□ 0.69
BBS4-204ENST00000562084 ZNF606Q8WXB4 792 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 CLPTM1LQ96KA5 538 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 RILPQ96NA2 401 aa19.37■□□□□ 0.69
BBS4-204ENST00000562084 MAP3K20Q9NYL2 800 aaKnown RBP19.37■□□□□ 0.69
BBS4-204ENST00000562084 HERC5Q9UII4 1024 aaKnown RBP19.37■□□□□ 0.69
BBS4-204ENST00000562084 PRR5-ARHGAP8B1AHC4 643 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 APOC4-APOC2K7ER74 178 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 MCF2LO15068 1137 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 KRT38O76015 456 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 USP1O94782 785 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 VNN1O95497 513 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 APOC2P02655 101 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 CDH5P33151 784 aaPredicted RBP19.36■□□□□ 0.69
BBS4-204ENST00000562084 RPL5P46777 297 aaKnown RBP19.36■□□□□ 0.69
BBS4-204ENST00000562084 ARHGAP8P85298 464 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 MTMR1Q13613 665 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 CCDC33Q8N5R6 958 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 MCPH1Q8NEM0 835 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 ACTRT2Q8TDY3 377 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 FNIP1Q8TF40 1166 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 ELMO3Q96BJ8 720 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 ZFRQ96KR1 1074 aaKnown RBP19.36■□□□□ 0.69
BBS4-204ENST00000562084 PKD2L1Q9P0L9 805 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 FEM1BQ9UK73 627 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 ZBTB21Q9ULJ3 1066 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 STYXL1Q9Y6J8 313 aa19.36■□□□□ 0.69
BBS4-204ENST00000562084 TCRBV7S3A2A0A539 114 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 BPGMP07738 259 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 SETSIPP0DME0 302 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 PRKCHP24723 683 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 CRHR1P34998 444 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 CACNB3P54284 484 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 ALDH18A1P54886 795 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 BASP1P80723 227 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 OGDHQ02218 1023 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 SPP2Q13103 211 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 MSLNQ13421 630 aaPredicted RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 UGCGQ16739 394 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 SFT2D3Q587I9 215 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 KLC3Q6P597 504 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 B3GNT6Q6ZMB0 384 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 MARVELD2Q8N4S9 558 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 ICA1LQ8NDH6 482 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 GDPD5Q8WTR4 605 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 KIFC3Q9BVG8 833 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 APOBEC3GQ9HC16 384 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 GPBP1L1Q9HC44 474 aaPredicted RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 CLRN2A0PK11 232 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 ARHGAP42A6NI28 874 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 DENRO43583 198 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 FAM189A1O60320 539 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 LDHAP00338 332 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 ITGA2BP08514 1039 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 EIF4BP23588 611 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 KDELR1P24390 212 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 ACAT1P24752 427 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 SERPINB9P50453 376 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 COPAP53621 1224 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 JAG1P78504 1218 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 SLC25A11Q02978 314 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 STX3Q13277 289 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 KCNJ11Q14654 390 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 MYBPC3Q14896 1274 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 ARMC3Q5W041 872 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 UGT2A3Q6UWM9 527 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 TMEM126BQ8IUX1 230 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 UBR7Q8N806 425 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 GSTCDQ8NEC7 633 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 GFM2Q969S9 779 aaKnown RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 LRRC39Q96DD0 335 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 ZNF70Q9UC06 446 aaPredicted RBP19.35■□□□□ 0.69
BBS4-204ENST00000562084 MAD1L1Q9Y6D9 718 aa19.35■□□□□ 0.69
BBS4-204ENST00000562084 TTLL13PA6NNM8 815 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms