RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 FOXR1Q6PIV2 292 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 TADA2BQ86TJ2 420 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 DDX27Q96GQ7 796 aaKnown RBP16.99■□□□□ 0.31
AP4E1-205ENST00000561393 CTNNAL1Q9UBT7 734 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 NAALADL1Q9UQQ1 740 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 APOC4-APOC2K7ER74 178 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 PPFIA2O75334 1257 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 LRCH4O75427 683 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 ALDH1A1P00352 501 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 APOC2P02655 101 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 C9orf57Q5W0N0 161 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 ITPRIPL1Q6GPH6 555 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 SEC16BQ96JE7 1060 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 TWNKQ96RR1 684 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 ULBP1Q9BZM6 244 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 PDLIM7Q9NR12 457 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 LDLRAD1Q5T700 205 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 C4orf50Q6ZRC1 276 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 LRRC34Q8IZ02 419 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 B3GALNT2Q8NCR0 500 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 MTA2O94776 668 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 PRKAR2AP13861 404 aaKnown RBP16.99■□□□□ 0.31
AP4E1-205ENST00000561393 KRT4P19013 534 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 RBL1P28749 1068 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 ASPAP45381 313 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 LRRC52Q8N7C0 313 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 STMN2Q93045 179 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
AP4E1-205ENST00000561393 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 LHX5Q9H2C1 402 aa16.99■□□□□ 0.31
AP4E1-205ENST00000561393 PIH1D1Q9NWS0 290 aaKnown RBP16.99■□□□□ 0.31
AP4E1-205ENST00000561393 ECM29Q5VYK3 1845 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 AGPSO00116 658 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 MEFVO15553 781 aaPredicted RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 STAMBPO95630 424 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 KITP10721 976 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 TYK2P29597 1187 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 NXNQ6DKJ4 435 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 TRIM42Q8IWZ5 723 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 TBCBQ99426 244 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 TACO1Q9BSH4 297 aaKnown RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 NUDT5Q9UKK9 219 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 SHOC2Q9UQ13 582 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 CNMDO75829 334 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 BDNFP23560 247 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 GJA5P36382 358 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 GEMIN4P57678 1058 aaKnown RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 ACAP1Q15027 740 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 CDCA2Q69YH5 1023 aaPredicted RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 MIB1Q86YT6 1006 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 MSL3Q8N5Y2 521 aaKnown RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 ANKRD52Q8NB46 1076 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 NETO2Q8NC67 525 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 FAM105AQ9NUU6 356 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 USP17L7P0C7H9 530 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 DNAJC3Q13217 504 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 ZNF572Q7Z3I7 529 aaPredicted RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 XYLT1Q86Y38 959 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 DCP1BQ8IZD4 617 aaKnown RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 PABPC5Q96DU9 382 aaKnown RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 TRIM62Q9BVG3 475 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 TRIM55Q9BYV6 548 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 FRMD8P1Q9BZ68 369 aaPredicted RBP16.98■□□□□ 0.31
AP4E1-205ENST00000561393 ZNF831Q5JPB2 1677 aa16.98■□□□□ 0.31
AP4E1-205ENST00000561393 IGKV6D-21A0A0A0MT36 114 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 E2F8A0AVK6 867 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 KCNK1O00180 336 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 TRUB2O95900 331 aaKnown RBP16.97■□□□□ 0.31
AP4E1-205ENST00000561393 ENPEPQ07075 957 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 TAF5Q15542 800 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 TAPT1Q6NXT6 567 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 PMF1Q6P1K2 205 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 DDX1Q92499 740 aaKnown RBP16.97■□□□□ 0.31
AP4E1-205ENST00000561393 SGSM3Q96HU1 749 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 PGLYRP2Q96PD5 576 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 APOL2Q9BQE5 337 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 CCDC68Q9H2F9 335 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 SMG5Q9UPR3 1016 aaKnown RBP16.97■□□□□ 0.31
AP4E1-205ENST00000561393 C2CD2LO14523 706 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 MROH9Q5TGP6 573 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 LCLAT1Q6UWP7 414 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 SP110Q9HB58 689 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 BNIP3LO60238 219 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 STBD1O95210 358 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 ELK3P41970 407 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 MAPRE1Q15691 268 aaKnown RBP16.97■□□□□ 0.31
AP4E1-205ENST00000561393 OLFML2BQ68BL8 750 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 LVRNQ6Q4G3 990 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 KCNT2Q6UVM3 1135 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 BBS12Q6ZW61 710 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 LRRC6Q86X45 466 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 ZDHHC17Q8IUH5 632 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 ATPAF2Q8N5M1 289 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 ART4Q93070 314 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 LPIN3Q9BQK8 851 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 PCDHGC3Q9UN70 934 aa16.97■□□□□ 0.31
AP4E1-205ENST00000561393 SMAPO00193 183 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 CRCPO75575 148 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 SKIP12755 728 aa16.96■□□□□ 0.31
AP4E1-205ENST00000561393 TCF4P15884 667 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms