RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 B3GNT9Q6UX72 402 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 SGMS1Q86VZ5 419 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 TTC9BQ8N6N2 239 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 IL17RCQ8NAC3 791 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 ATAD1Q8NBU5 361 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 ENGASEQ8NFI3 743 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 BEST2Q8NFU1 509 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 BAHD1Q8TBE0 780 aaPredicted RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 CCDC12Q8WUD4 166 aaPredicted RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 TMEM176AQ96HP8 235 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 TMEM87BQ96K49 555 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 MTA3Q9BTC8 594 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 NFKBIZQ9BYH8 718 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 LRRC2Q9BYS8 371 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 ZMYND12Q9H0C1 365 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 IL25Q9H293 177 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 KIF9Q9HAQ2 790 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 CPNE5Q9HCH3 593 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 XPNPEP1Q9NQW7 623 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 SLC38A7Q9NVC3 462 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 PRMT7Q9NVM4 692 aaPredicted RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 RBM28Q9NW13 759 aaKnown RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 WRAP73Q9P2S5 460 aaPredicted RBP5.77□□□□□ -1.49
HERC1-213ENST00000561359 ZMYM5Q9UJ78 669 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 WNT6Q9Y6F9 365 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 POLQO75417 2590 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 FBN2P35556 2912 aa5.77□□□□□ -1.49
HERC1-213ENST00000561359 PCDH15Q96QU1 1955 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 COL5A1P20908 1838 aaPredicted RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 A0A1B0GTW7 788 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 SMIM28A0A1B0GU29 152 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 ESYT2A0FGR8 921 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 BRINP1O60477 761 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 GLRA2P23416 452 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CDC25BP30305 580 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 NMT1P30419 496 aaKnown RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 ACTN2P35609 894 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 ARL2P36404 184 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 YARSP54577 528 aaKnown RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 UCNP55089 124 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CLDN6P56747 220 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 RIPPLY3P57055 190 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 ATP11AP98196 1134 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 YWHAHQ04917 246 aaPredicted RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 TARDBPQ13148 414 aaKnown RBP eCLIP5.76□□□□□ -1.49
HERC1-213ENST00000561359 GPR17Q13304 367 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 PRPF4BQ13523 1007 aaKnown RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 HLA-BQ31612 363 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 DCAF4L1Q3SXM0 396 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 Q4G0T1 1027 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 HSF5Q4G112 596 aaPredicted RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 WDR45BQ5MNZ6 344 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 EMC10Q5UCC4 262 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 TXNDC8Q6A555 127 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CENPPQ6IPU0 288 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 IL27RAQ6UWB1 636 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 ATG14Q6ZNE5 492 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 USP37Q86T82 979 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 ZBTB8OSQ8IWT0 167 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 C4orf19Q8IY42 314 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 EFCAB13Q8IY85 973 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CACTIN-AS1Q8N1I8 211 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 RIN3Q8TB24 985 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 BICD2Q8TD16 824 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 OSCP1Q8WVF1 389 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 TP53INP1Q96A56 240 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CCDC43Q96MW1 224 aaKnown RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 SEPT5Q99719 369 aaPredicted RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 LXNQ9BS40 222 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 NRSN2Q9GZP1 204 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 MUC3BQ9H195 1237 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 POLR3FQ9H1D9 316 aaPredicted RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 MIR1-1HGQ9H1L0 117 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 ZDHHC4Q9NPG8 344 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 TMEM63CQ9P1W3 806 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CALCOCO1Q9P1Z2 691 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 CYP8B1Q9UNU6 501 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 BTBD3Q9Y2F9 522 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 PCDHGB2Q9Y5G2 931 aa5.76□□□□□ -1.49
HERC1-213ENST00000561359 TIMM13Q9Y5L4 95 aaPredicted RBP5.76□□□□□ -1.49
HERC1-213ENST00000561359 NBASA2RRP1 2371 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MUC22E2RYF6 1773 aaPredicted RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 NBPF19A0A087WUL8 3843 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 IGHV1OR15-9A0A0B4J2B8 117 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MTMR11A4FU01 709 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MYMKA6NI61 221 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 OR6C75A6NL08 312 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 MEI4A8MW99 385 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 EDIL3O43854 480 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 ZNF217O75362 1048 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 DEAF1O75398 565 aaPredicted RBP5.75□□□□□ -1.49
HERC1-213ENST00000561359 FAM13AO94988 1023 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 TDP2O95551 362 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 NFATC1O95644 943 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 PDGFAP04085 211 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 CES1P23141 567 aa5.75□□□□□ -1.49
HERC1-213ENST00000561359 DDX6P26196 483 aaKnown RBP eCLIP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms