RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 TNIP3Q96KP6 325 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 C7orf25Q9BPX7 421 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 SCNM1Q9BWG6 230 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 DMAP1Q9NPF5 467 aaPredicted RBP12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 SPHK2Q9NRA0 654 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 DEC1Q9P2X7 70 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 NXF1Q9UBU9 619 aaKnown RBP12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 CHORDC1Q9UHD1 332 aaPredicted RBP12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 STARD13Q9Y3M8 1113 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 ATP8B3O60423 1300 aa12.55□□□□□ -0.4
CARMIL3-204ENST00000561354 ASCC3Q8N3C0 2202 aaKnown RBP12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SPTLC2O15270 562 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 AP5Z1O43299 807 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 TOP3BO95985 862 aaKnown RBP12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SPINK2P20155 84 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 MAPK8P45983 427 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 AP3M2P53677 418 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SLC5A3P53794 718 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 CLDN10P78369 228 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SEMA3BQ13214 749 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 BMT2Q1RMZ1 405 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 ARMCX6Q7L4S7 300 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 ZNF513Q8N8E2 541 aaPredicted RBP12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 NAT16Q8N8M0 369 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 TERB1Q8NA31 727 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 CEP76Q8TAP6 659 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 GATA6Q92908 595 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 DHX58Q96C10 678 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SMARCD1Q96GM5 515 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 ZDHHC4Q9NPG8 344 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 SLC6A14Q9UN76 642 aa12.54□□□□□ -0.4
CARMIL3-204ENST00000561354 MYO18AQ92614 2054 aaKnown RBP12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 STX6O43752 255 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 PHACTR2O75167 634 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 GABRG2P18507 467 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 ITPKAP23677 461 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 NTSR1P30989 418 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 CDH8P55286 799 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 DUOXA1Q1HG43 343 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 ANO4Q32M45 955 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 ZNF667Q5HYK9 610 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 C10orf76Q5T2E6 689 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 RABEPKQ7Z6M1 372 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 PIP4P1Q86T03 277 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 MED10Q9BTT4 135 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 MAGEF1Q9HAY2 307 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 GMIPQ9P107 970 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 HCN2Q9UL51 889 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 NEUROG3Q9Y4Z2 214 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 PI4KAP42356 2102 aa12.53□□□□□ -0.4
CARMIL3-204ENST00000561354 PCNX2A6NKB5 2137 aa12.52□□□□□ -0.4
CARMIL3-204ENST00000561354 CFAP47Q6ZTR5 3102 aa12.52□□□□□ -0.4
CARMIL3-204ENST00000561354 PVALEFA0A1B0GWK0 134 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 A0A1W2PQF6 199 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 EXOC3O60645 756 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CUTAO60888 179 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF217O75362 1048 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 YEATS4O95619 227 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 C4BPAP04003 597 aaKnown RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CFIP05156 583 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 SERPINF2P08697 491 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 HOXB2P14652 356 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ATXN3P54252 364 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 RPL6Q02878 288 aaKnown RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 GFPT1Q06210 699 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF33AQ06730 810 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 BIRC3Q13489 604 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 KNOP1Q1ED39 458 aaKnown RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF699Q32M78 642 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 GRAMD4Q6IC98 578 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CRYBG2Q8N1P7 616 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 HDDC3Q8N4P3 179 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ZMIZ2Q8NF64 920 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 PLEKHO2Q8TD55 490 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 WBP2Q969T9 261 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 ZNF396Q96N95 335 aaPredicted RBP12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 NACA2Q9H009 215 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 FBXO44Q9H4M3 255 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 SMYD3Q9H7B4 428 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CSNK1G1Q9HCP0 422 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 CD248Q9HCU0 757 aa12.52□□□□□ -0.41
CARMIL3-204ENST00000561354 KRT82Q9NSB4 513 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms