RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 SHC3Q92529 594 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 SECISBP2LQ93073 1101 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 FAM83CQ9BQN1 747 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 SIT1Q9Y3P8 196 aa20.97■□□□□ 0.95
TSPAN3-210ENST00000561277 THAP12O43422 761 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 TBX18O95935 607 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 DCNP07585 359 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 ARSAP15289 507 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 ZNF18P17022 549 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 PLA2G4AP47712 749 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 RGS7P49802 495 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 COPB1P53618 953 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 ADIGQ0VDE8 80 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 FKBP15Q5T1M5 1219 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 FUCA2Q9BTY2 467 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 DDX23Q9BUQ8 820 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 ULBP1Q9BZM6 244 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 HSD3B7Q9H2F3 369 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 HPS4Q9NQG7 708 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 DUS2Q9NX74 493 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 CFAP97Q9P2B7 532 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 NUDT5Q9UKK9 219 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 MTF2Q9Y483 593 aaPredicted RBP20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 FHOD1Q9Y613 1164 aa20.96■□□□□ 0.95
TSPAN3-210ENST00000561277 RARGP13631 454 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 IFNAR2P48551 515 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 ZNF165P49910 485 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 ITPRIPL2Q3MIP1 535 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 DPY19L2P1Q6NXN4 242 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 SCD5Q86SK9 330 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 DHX40Q8IX18 779 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 SIX6OS1Q8N1H7 587 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 OSCP1Q8WVF1 389 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 BPIFA3Q9BQP9 254 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 LTB4R2Q9NPC1 389 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 CYLDQ9NQC7 956 aa20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 LIMA1Q9UHB6 759 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 NDRG2Q9UN36 371 aaKnown RBP20.95■□□□□ 0.94
TSPAN3-210ENST00000561277 SHISA7A6NL88 538 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 FAM170BA6NMN3 283 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 PIK3R2O00459 728 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 ZBED1O96006 694 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 IRF1P10914 325 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 ATP1A3P13637 1013 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 LCP1P13796 627 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 TCF3P15923 654 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 TARSP26639 723 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 KLK7P49862 253 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 RUNX3Q13761 415 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 PDGFRLQ15198 375 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 KLHDC7AQ5VTJ3 777 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 PMF1Q6P1K2 205 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 FAM3CQ92520 227 aa20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 NDRG1Q92597 394 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 ZFRQ96KR1 1074 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.94■□□□□ 0.94
TSPAN3-210ENST00000561277 OTOL1A6NHN0 477 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 FOXN3O00409 490 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 MAN2B1O00754 1011 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 MDM4O15151 490 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 MED7O43513 233 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 ATP5C1P36542 298 aaKnown RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 PSEN1P49768 467 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 DENND1BQ6P3S1 775 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 DDX42Q86XP3 938 aaKnown RBP eCLIP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 CCDC105Q8IYK2 499 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 SLC35F5Q8WV83 523 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 ZNF606Q8WXB4 792 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 C8orf33Q9H7E9 229 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 MRPS17Q9Y2R5 130 aaKnown RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 SMTNL1A8MU46 457 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 LGALS16A8MUM7 142 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 SPECC1L-ADORA2AF8WAN1 911 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 GLULP15104 373 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 UCHL3P15374 230 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 CTHP32929 405 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 YWHAGP61981 247 aaKnown RBP eCLIP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 DRAP1Q14919 205 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 C10orf120Q5SQS8 335 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 KCTD13Q8WZ19 329 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 ATP2A3Q93084 1043 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 LINC00597Q9H2U6 94 aa20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 FAM207AQ9NSI2 230 aaPredicted RBP20.93■□□□□ 0.94
TSPAN3-210ENST00000561277 RALAP11233 206 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 PTK2Q05397 1052 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 SKOR2Q2VWA4 1001 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 EML3Q32P44 896 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 ZSCAN23Q3MJ62 389 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 PM20D1Q6GTS8 502 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 TXNDC11Q6PKC3 985 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 ARHGAP18Q8N392 663 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 CPA6Q8N4T0 437 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 PCMTD1Q96MG8 357 aaPredicted RBP20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 PLCB1Q9NQ66 1216 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 ST7Q9NRC1 585 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 CLIC5Q9NZA1 410 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 SH3BP1Q9Y3L3 701 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 MIA3Q5JRA6 1907 aa20.92■□□□□ 0.94
TSPAN3-210ENST00000561277 GPD2P43304 727 aa20.91■□□□□ 0.94
TSPAN3-210ENST00000561277 UBXN1Q04323 297 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms