RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 LTFP02788 710 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 GLI1P08151 1106 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 MMEP08473 750 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 IRF1P10914 325 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 SLC2A3P11169 496 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 GDI1P31150 447 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CLCN1P35523 988 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 YWHAZP63104 245 aaKnown RBP11.23□□□□□ -0.61
TPM1-229ENST00000561242 EFEMP1Q12805 493 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 PDCLQ13371 301 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 PDGFRLQ15198 375 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 SLC5A9Q2M3M2 681 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 BSPRYQ5W0U4 402 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 DCUN1D2Q6PH85 259 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 GAREM2Q75VX8 874 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 MIB1Q86YT6 1006 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 TMC8Q8IU68 726 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 MFSD6LQ8IWD5 586 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 UNC45BQ8IWX7 931 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CPA6Q8N4T0 437 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 UBR7Q8N806 425 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CCDC26Q8TAB7 109 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 SLC35F5Q8WV83 523 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CPA5Q8WXQ8 436 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 SYN2Q92777 582 aaPredicted RBP11.23□□□□□ -0.61
TPM1-229ENST00000561242 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 NAA15Q9BXJ9 866 aaKnown RBP11.23□□□□□ -0.61
TPM1-229ENST00000561242 SLC46A2Q9BY10 475 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 RBSNQ9H1K0 784 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 POPDC2Q9HBU9 364 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 DUS2Q9NX74 493 aaKnown RBP11.23□□□□□ -0.61
TPM1-229ENST00000561242 SMPD4Q9NXE4 827 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 RRN3Q9NYV6 651 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 ADAM22Q9P0K1 906 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 MARCH2Q9P0N8 246 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CDH22Q9UJ99 828 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 NME7Q9Y5B8 376 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 CPQQ9Y646 472 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 NCANO14594 1321 aa11.23□□□□□ -0.61
TPM1-229ENST00000561242 GOLGA8SH3BPF8 625 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
TPM1-229ENST00000561242 HSF2BPO75031 334 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 APOEP02649 317 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 HMBSP08397 361 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
TPM1-229ENST00000561242 SRFP11831 508 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 ABCB4P21439 1286 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 WEE1P30291 646 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 CASP14P31944 242 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 GPD2P43304 727 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 SLC11A2P49281 568 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 USP46P62068 366 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 ZNF268Q14587 947 aaPredicted RBP11.22□□□□□ -0.61
TPM1-229ENST00000561242 E2F5Q15329 346 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 SPA17Q15506 151 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 ARL13BQ3SXY8 428 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 DCAF6Q58WW2 860 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 FAM102AQ5T9C2 384 aaPredicted RBP11.22□□□□□ -0.61
TPM1-229ENST00000561242 PMF1Q6P1K2 205 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 SARM1Q6SZW1 724 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 PARM1Q6UWI2 310 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 GPIHBP1Q8IV16 184 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 SLC44A3Q8N4M1 653 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 SH3RF2Q8TEC5 729 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 ATP2A3Q93084 1043 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 SERPINB11Q96P15 392 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 CYP2S1Q96SQ9 504 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 HSD3B7Q9H2F3 369 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 HAUS4Q9H6D7 363 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 FAM204AQ9H8W3 233 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 MRPL47Q9HD33 250 aaKnown RBP11.22□□□□□ -0.61
TPM1-229ENST00000561242 AIPL1Q9NZN9 384 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 CFAP97Q9P2B7 532 aa11.22□□□□□ -0.61
TPM1-229ENST00000561242 TMCO5BA8MYB1 307 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 E5RJQ4 531 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 CHADO15335 359 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 PAPLNO95428 1278 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 F9P00740 461 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 CALCAP01258 141 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 PTMAP06454 111 aaKnown RBP11.21□□□□□ -0.61
TPM1-229ENST00000561242 ASGR2P07307 311 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 CHKAP35790 457 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 VIPR2P41587 438 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 CCR2P41597 374 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 CACNA2D1P54289 1103 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 SLC6A3Q01959 620 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 GRM2Q14416 872 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 ODF2Q5BJF6 829 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 RAB41Q5JT25 222 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 PM20D1Q6GTS8 502 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 TANGO2Q6ICL3 276 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 DNAJC24Q6P3W2 148 aa11.21□□□□□ -0.61
TPM1-229ENST00000561242 KLHDC10Q6PID8 442 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms