RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 PPP2R5DQ14738 602 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 MTF1Q14872 753 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 ZNF77Q15935 545 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 NFE2Q16621 373 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-211ENST00000561010 MDH1BQ5I0G3 518 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 SHC4Q6S5L8 630 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 PRR23CQ6ZRP0 262 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 LONP2Q86WA8 852 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 NT5DC4Q86YG4 428 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 CCDC65Q8IXS2 484 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 LRRC52Q8N7C0 313 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 LINC00301Q8NCQ3 95 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 RPLP0P6Q8NHW5 317 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 SH3RF2Q8TEC5 729 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 LEO1Q8WVC0 666 aaPredicted RBP7.73□□□□□ -1.17
GABPB1-211ENST00000561010 ANKRD36BP1Q96IX9 119 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 MMS19Q96T76 1030 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 ACBD6Q9BR61 282 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 IER2Q9BTL4 223 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 TRIM9Q9C026 710 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 ARRDC1-AS1Q9H2J1 176 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 DPEP3Q9H4B8 488 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 ZDHHC4Q9NPG8 344 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 SEMA4GQ9NTN9 838 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 DUS2Q9NX74 493 aaKnown RBP7.73□□□□□ -1.17
GABPB1-211ENST00000561010 GDAP2Q9NXN4 497 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 GCNT4Q9P109 453 aa7.73□□□□□ -1.17
GABPB1-211ENST00000561010 CEP295Q9C0D2 2601 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 AKAP13Q12802 2813 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TRAV19A0A0A6YYK7 116 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ZNF233A6NK53 670 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 K7ELQ4 463 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TRDMT1O14717 391 aaKnown RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TGFB1I1O43294 461 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PAPSS2O95340 614 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 LDHAP00338 332 aaKnown RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ABL1P00519 1130 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TNNC2P02585 160 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 RETP07949 1114 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PAX3P23760 479 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 GRIK1P39086 918 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 AFMP43652 599 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PLA2G4AP47712 749 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 RPL10AP62906 217 aaKnown RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 POU5F1Q01860 360 aaKnown RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 SMARCB1Q12824 385 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 GRSF1Q12849 480 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ALCAMQ13740 583 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PKP1Q13835 747 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 GAB4Q2WGN9 574 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 C4orf17Q53FE4 359 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PPM1JQ5JR12 505 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 FAM26FQ5R3K3 315 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TCEAL6Q6IPX3 200 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 CC2D1AQ6P1N0 951 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 FAM171BQ6P995 826 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 SCARA5Q6ZMJ2 495 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 EPM2AIP1Q7L775 607 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 HS2ST1Q7LGA3 356 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TRAPPC11Q7Z392 1133 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 WDR5BQ86VZ2 330 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TMEM86AQ8N2M4 240 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TOP6BLQ8N6T0 577 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PLEKHO2Q8TD55 490 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TCEAL3Q969E4 200 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 CCDC127Q96BQ5 260 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 TRMT2BQ96GJ1 504 aaKnown RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 MSANTD3Q96H12 275 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 PCED1BQ96HM7 432 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ZNF518BQ9C0D4 1074 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 RNF38Q9H0F5 515 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 GZF1Q9H116 711 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ECT2Q9H8V3 914 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ABCB6Q9NP58 842 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 SLC39A2Q9NP94 309 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 AGPAT3Q9NRZ7 376 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 KBTBD4Q9NVX7 518 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 SMPD4Q9NXE4 827 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 MAGEC2Q9UBF1 373 aaPredicted RBP7.72□□□□□ -1.17
GABPB1-211ENST00000561010 ZNF232Q9UNY5 417 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 CKAP5Q14008 2032 aa7.72□□□□□ -1.17
GABPB1-211ENST00000561010 IGF2RP11717 2491 aa7.71□□□□□ -1.17
GABPB1-211ENST00000561010 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 F8VP50 259 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 POLR2DO15514 142 aaKnown RBP7.71□□□□□ -1.18
GABPB1-211ENST00000561010 RPP40O75818 363 aaKnown RBP7.71□□□□□ -1.18
GABPB1-211ENST00000561010 KRT37O76014 449 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 CLSTN1O94985 981 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 USP17L7P0C7H9 530 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 CCDC192P0DO97 292 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 VSIG8P0DPA2 414 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 HDCP19113 662 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 TNNI1P19237 187 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 WARSP23381 471 aaKnown RBP7.71□□□□□ -1.18
GABPB1-211ENST00000561010 DDX6P26196 483 aaKnown RBP eCLIP7.71□□□□□ -1.18
GABPB1-211ENST00000561010 PCSK1P29120 753 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 OPRD1P41143 372 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 IFNAR2P48551 515 aa7.71□□□□□ -1.18
GABPB1-211ENST00000561010 LHX1P48742 406 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms