RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 OSER1Q9NX31 292 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 HOOK1Q9UJC3 728 aaKnown RBP17.11■□□□□ 0.33
SPG21-211ENST00000560564 SCML2Q9UQR0 700 aa17.11■□□□□ 0.33
SPG21-211ENST00000560564 CCDC163A0A0D9SF12 145 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 ANTXRLA6NF34 631 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 CYP26A1O43174 497 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 TLR5O60602 858 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 ATG13O75143 517 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 CNR2P34972 360 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 KIF11P52732 1056 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 DCAF17Q5H9S7 520 aaPredicted RBP17.1■□□□□ 0.33
SPG21-211ENST00000560564 TCERG1LQ5VWI1 586 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 HEATR6Q6AI08 1181 aaKnown RBP17.1■□□□□ 0.33
SPG21-211ENST00000560564 ISM2Q6H9L7 571 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 TTI2Q6NXR4 508 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 FOXR2Q6PJQ5 311 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 WDR5BQ86VZ2 330 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 ABCA7Q8IZY2 2146 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 TTC39CQ8N584 583 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 EXOC4Q96A65 974 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 DHTKD1Q96HY7 919 aaPredicted RBP17.1■□□□□ 0.33
SPG21-211ENST00000560564 HINFPQ9BQA5 517 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 DUSP16Q9BY84 665 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 NMUR1Q9HB89 426 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 NCDNQ9UBB6 729 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 ARMCX3Q9UH62 379 aaPredicted RBP17.1■□□□□ 0.33
SPG21-211ENST00000560564 CIZ1Q9ULV3 898 aaPredicted RBP17.1■□□□□ 0.33
SPG21-211ENST00000560564 USP3Q9Y6I4 520 aa17.1■□□□□ 0.33
SPG21-211ENST00000560564 K7EQS6 105 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 PSMA7O14818 248 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 TBX18O95935 607 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
SPG21-211ENST00000560564 ACO1P21399 889 aaKnown RBP17.09■□□□□ 0.33
SPG21-211ENST00000560564 MORC3Q14149 939 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 LPAL2Q16609 132 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 ARHGAP17Q68EM7 881 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 SYT13Q7L8C5 426 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 C12orf40Q86WS4 652 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 UBR7Q8N806 425 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 RPLP0P6Q8NHW5 317 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 JAKMIP2Q96AA8 810 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 OTUB2Q96DC9 234 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 PARD6AQ9NPB6 346 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 TLR8Q9NR97 1041 aaKnown RBP17.09■□□□□ 0.33
SPG21-211ENST00000560564 TBC1D14Q9P2M4 693 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 GON4LQ3T8J9 2241 aa17.09■□□□□ 0.33
SPG21-211ENST00000560564 LAMA1P25391 3075 aa17.08■□□□□ 0.33
SPG21-211ENST00000560564 EIF2DP41214 584 aaKnown RBP17.08■□□□□ 0.32
SPG21-211ENST00000560564 SLC6A11P48066 632 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 PXNP49023 591 aaPredicted RBP17.08■□□□□ 0.32
SPG21-211ENST00000560564 CUL2Q13617 745 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 SIM2Q14190 667 aaPredicted RBP17.08■□□□□ 0.32
SPG21-211ENST00000560564 LY6G5CQ5SRR4 150 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 LAIR1Q6GTX8 287 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 KLHDC10Q6PID8 442 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 CCDC186Q7Z3E2 898 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 SCD5Q86SK9 330 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 SFTPA1Q8IWL2 248 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 BBS7Q8IWZ6 715 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 PHTF2Q8N3S3 785 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 USP33Q8TEY7 942 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 RMDN1Q96DB5 314 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 TMEM176AQ96HP8 235 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 CEP63Q96MT8 703 aa17.08■□□□□ 0.32
SPG21-211ENST00000560564 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
SPG21-211ENST00000560564 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
SPG21-211ENST00000560564 A0A0A0MRY4 1105 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 A0A1W2PQH9 124 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 PMM2O15305 246 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 ADH1CP00326 375 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 PPP1R2P41236 205 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 ID4P47928 161 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 FMO5P49326 533 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 STIM1Q13586 685 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 ETFBKMTQ8IXQ9 262 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 ZNF276Q8N554 614 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 CAMKK1Q8N5S9 505 aa17.07■□□□□ 0.32
SPG21-211ENST00000560564 HEXIM2Q96MH2 286 aaKnown RBP17.07■□□□□ 0.32
SPG21-211ENST00000560564 METTL14Q9HCE5 456 aaKnown RBP17.07■□□□□ 0.32
SPG21-211ENST00000560564 HOXC11O43248 304 aaPredicted RBP17.06■□□□□ 0.32
SPG21-211ENST00000560564 RETP07949 1114 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 ADH5P11766 374 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 ATP5C1P36542 298 aaKnown RBP17.06■□□□□ 0.32
SPG21-211ENST00000560564 DMC1Q14565 340 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 RAB41Q5JT25 222 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 PRR23BQ6ZRT6 265 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 HTR3DQ70Z44 454 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 PIGZQ86VD9 579 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 GAB3Q8WWW8 586 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 ACDQ96AP0 544 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 HHIPQ96QV1 700 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 UBXN6Q9BZV1 441 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 DLL3Q9NYJ7 618 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 GMEB2Q9UKD1 530 aa17.06■□□□□ 0.32
SPG21-211ENST00000560564 SLC8A2Q9UPR5 921 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms