RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 TMEM25Q86YD3 366 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 ADGRF2Q8IZF7 708 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 ZCCHC9Q8N567 271 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 TOP6BLQ8N6T0 577 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 LSM14AQ8ND56 463 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 WBP2Q969T9 261 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 OTUB2Q96DC9 234 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 CEP295NLQ96MC4 621 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 CDC6Q99741 560 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 GABRG3Q99928 467 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 SYT15Q9BQS2 421 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 PARVGQ9HBI0 331 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 SPHK2Q9NRA0 654 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 WSB2Q9NYS7 404 aaPredicted RBP9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 BTBD3Q9Y2F9 522 aa9.54□□□□□ -0.88
RABGGTA-217ENST00000560521 ZNF462Q96JM2 2506 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 KCNJ18B7U540 433 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 F8VP50 259 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 FLRT2O43155 660 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 ZBTB24O43167 697 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 HOXC11O43248 304 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 TLX3O43711 291 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 FAM13AO94988 1023 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 CER1O95813 267 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 ANXA13P27216 316 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 CD6P30203 668 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 EIF2S3P41091 472 aaKnown RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 MATKP42679 507 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 ANAPC15P60006 121 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 NOP14P78316 857 aaKnown RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 MYO1EQ12965 1108 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 DHX8Q14562 1220 aaKnown RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 PTPRNQ16849 979 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 ANO4Q32M45 955 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 PREPLQ4J6C6 727 aaPredicted RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 DCAF12L1Q5VU92 463 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 BTBD8Q5XKL5 378 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 SDE2Q6IQ49 451 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 PCSK4Q6UW60 755 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 NUDT18Q6ZVK8 323 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 GPBP1Q86WP2 473 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 DDX42Q86XP3 938 aaKnown RBP eCLIP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 CHPFQ8IZ52 775 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 CSGALNACT2Q8N6G5 542 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 LRRC52Q8N7C0 313 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 C1orf216Q8TAB5 229 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 KBTBD7Q8WVZ9 684 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 POMGNT1Q8WZA1 660 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 TOE1Q96GM8 510 aaKnown RBP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 PCED1BQ96HM7 432 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 GPR174Q9BXC1 333 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 MIR1-1HGQ9H1L0 117 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 TMEM30AQ9NV96 361 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 SIX4Q9UIU6 781 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 CDH9Q9ULB4 789 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 NFE2L3Q9Y4A8 694 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 NME7Q9Y5B8 376 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 PCDHGB2Q9Y5G2 931 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 CFAP46Q8IYW2 2715 aa9.53□□□□□ -0.88
RABGGTA-217ENST00000560521 MEI4A8MW99 385 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 E9PAM4 449 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 TULP1O00294 542 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 PLK4O00444 970 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 TRIM66O15016 1216 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 BCAT2O15382 392 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 COCHO43405 550 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 KRT19P08727 400 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 PDGFRBP09619 1106 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 NCAM1P13591 858 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CACNA2D1P54289 1103 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CYP27A1Q02318 531 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 IFRD2Q12894 506 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 TDRD10Q5VZ19 366 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 GRAMD4Q6IC98 578 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 IL27RAQ6UWB1 636 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 DHRS13Q6UX07 377 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 KIAA1324Q6UXG2 1013 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 DPH6Q7L8W6 267 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 METTL3Q86U44 580 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CADM4Q8NFZ8 388 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 MYCBPAPQ8TBZ2 947 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CACTINQ8WUQ7 758 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CDK5RAP3Q96JB5 506 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 C8orf48Q96LL4 319 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 KIF2CQ99661 725 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 ST6GALNAC4Q9H4F1 302 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 ZHX3Q9H4I2 956 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 ITM2CQ9NQX7 267 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 BLOC1S4Q9NUP1 217 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 EHD2Q9NZN4 543 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 CHORDC1Q9UHD1 332 aaPredicted RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 EIF2B4Q9UI10 523 aaKnown RBP9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 SH3BP1Q9Y3L3 701 aa9.52□□□□□ -0.89
RABGGTA-217ENST00000560521 A0A1B0GVT2 93 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms