RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 MED10Q9BTT4 135 aa12.32□□□□□ -0.44
IRF9-209ENST00000560365 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.447e-11■■■■■ 260.8
IRF9-209ENST00000560365 PANK4Q9NVE7 773 aa12.32□□□□□ -0.44
IRF9-209ENST00000560365 LSM7Q9UK45 103 aaKnown RBP12.32□□□□□ -0.44
IRF9-209ENST00000560365 STARD13Q9Y3M8 1113 aa12.32□□□□□ -0.44
IRF9-209ENST00000560365 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
IRF9-209ENST00000560365 IGF2RP11717 2491 aa12.32□□□□□ -0.44
IRF9-209ENST00000560365 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 DLATP10515 647 aaKnown RBP12.31□□□□□ -0.44
IRF9-209ENST00000560365 NDUFV2P19404 249 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 STAT6P42226 847 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 TUBP50607 506 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 STARD3Q14849 445 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 RABEP1Q15276 862 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 COL28A1Q2UY09 1125 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 KIAA1324Q6UXG2 1013 aaKnown RBP12.31□□□□□ -0.44
IRF9-209ENST00000560365 TRAPPC11Q7Z392 1133 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 LIMS2Q7Z4I7 341 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 SLC41A1Q8IVJ1 513 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 BBS7Q8IWZ6 715 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 PHTF2Q8N3S3 785 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 PNPLA1Q8N8W4 532 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 B3GALNT2Q8NCR0 500 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 OR5B17Q8NGF7 314 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 SETD7Q8WTS6 366 aaKnown RBP12.31□□□□□ -0.44
IRF9-209ENST00000560365 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 WDR35Q9P2L0 1181 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 CHORDC1Q9UHD1 332 aaPredicted RBP12.31□□□□□ -0.44
IRF9-209ENST00000560365 SCN1AP35498 2009 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 TCHHQ07283 1943 aa12.31□□□□□ -0.44
IRF9-209ENST00000560365 THADAQ6YHU6 1953 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 A0A1B0GTW7 788 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 A0A1W2PQF6 199 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 NEDD8-MDP1E9PL57 170 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 CER1O95813 267 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 CHRM1P11229 460 aaPredicted RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 CASP5P51878 434 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 GRIK2Q13002 908 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 E2F5Q15329 346 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 EGFLAMQ63HQ2 1017 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 CCNI2Q6ZMN8 369 aaPredicted RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 TMEM25Q86YD3 366 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 CBWD2Q8IUF1 395 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 HNRNPLLQ8WVV9 542 aaKnown RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 DNAJC19Q96DA6 116 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 ZNF419Q96HQ0 510 aaPredicted RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 TNIP3Q96KP6 325 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 DUSP9Q99956 384 aaKnown RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 BBS2Q9BXC9 721 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 LRRC27Q9C0I9 530 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 MIR1-1HGQ9H1L0 117 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 HSPBP1Q9NZL4 362 aa12.3□□□□□ -0.44
IRF9-209ENST00000560365 ZNF638Q14966 1978 aaKnown RBP12.3□□□□□ -0.44
IRF9-209ENST00000560365 OBSL1O75147 1896 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 GFRA2O00451 464 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 CLDN5O00501 218 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 PHACTR2O75167 634 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 TYRP14679 529 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 CD6P30203 668 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 DGKGP49619 791 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 SLC5A3P53794 718 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 SOWAHCQ53LP3 525 aaPredicted RBP12.29□□□□□ -0.44
IRF9-209ENST00000560365 IL27RAQ6UWB1 636 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 TOGARAM2Q6ZUX3 1019 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 SYAP1Q96A49 352 aaPredicted RBP12.29□□□□□ -0.44
IRF9-209ENST00000560365 ERLEC1Q96DZ1 483 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 SMARCD1Q96GM5 515 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 TMX3Q96JJ7 454 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 KIF2CQ99661 725 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 GABRG3Q99928 467 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 DPEP3Q9H4B8 488 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 FBXO44Q9H4M3 255 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 CCSER2Q9H7U1 834 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 TLR8Q9NR97 1041 aaKnown RBP12.29□□□□□ -0.44
IRF9-209ENST00000560365 COMMD8Q9NX08 183 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 PPP4R2Q9NY27 417 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 NXF1Q9UBU9 619 aaKnown RBP12.29□□□□□ -0.44
IRF9-209ENST00000560365 AKAP13Q12802 2813 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 ATG2BQ96BY7 2078 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 KIAA1549LQ6ZVL6 1849 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 PTPRJQ12913 1337 aa12.29□□□□□ -0.44
IRF9-209ENST00000560365 NUP205Q92621 2012 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 VPS37CA5D8V6 355 aaPredicted RBP12.28□□□□□ -0.44
IRF9-209ENST00000560365 CACNG3O60359 315 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 TLR5O60602 858 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 GJB3O75712 270 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 NCAM1P13591 858 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 MAOBP27338 520 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 ATICP31939 592 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 MATKP42679 507 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 CACNA2D1P54289 1103 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
IRF9-209ENST00000560365 SNRNP35Q16560 246 aaKnown RBP12.28□□□□□ -0.44
IRF9-209ENST00000560365 SNX30Q5VWJ9 437 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 TPGS1Q6ZTW0 290 aa12.28□□□□□ -0.44
IRF9-209ENST00000560365 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms