RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 TULP3O75386 442 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 C4BPAP04003 597 aaKnown RBP11.77□□□□□ -0.53
HERC1-204ENST00000559715 ADH5P11766 374 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 GABRG2P18507 467 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 TNNI1P19237 187 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 ANXA13P27216 316 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 YWHAQP27348 245 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 DHPSP49366 369 aaPredicted RBP11.77□□□□□ -0.53
HERC1-204ENST00000559715 KDSRQ06136 332 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SEMA3BQ13214 749 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SPDYCQ5MJ68 293 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 C1orf220Q5T0J3 134 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 DAB2IPQ5VWQ8 1189 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SLC23A3Q6PIS1 610 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 FAM35AQ86V20 835 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SYT12Q8IV01 421 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 BBS7Q8IWZ6 715 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 XXYLT1Q8NBI6 393 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 PARD3BQ8TEW8 1205 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 TMEM174Q8WUU8 243 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 OVCA2Q8WZ82 227 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SLITRK1Q96PX8 696 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 ACOX2Q99424 681 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SMOQ99835 787 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 SNX25Q9H3E2 840 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 CUEDC2Q9H467 287 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 CAPN10Q9HC96 672 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 CSNK1G1Q9HCP0 422 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 ARHGEF4Q9NR80 690 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 DMAC2Q9NW81 257 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 EHD2Q9NZN4 543 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 TFIP11Q9UBB9 837 aaKnown RBP11.77□□□□□ -0.53
HERC1-204ENST00000559715 ZMIZ1Q9ULJ6 1067 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 STARD13Q9Y3M8 1113 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 ACACAQ13085 2346 aa11.77□□□□□ -0.53
HERC1-204ENST00000559715 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 UPK3BL1B0FP48 263 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 HHLA1C9JL84 531 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 UPK3BL2E5RIL1 263 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 SPTLC2O15270 562 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 KLRC4O43908 158 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 TBX18O95935 607 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 ADH1CP00326 375 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 ABL1P00519 1130 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 APODP05090 189 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 MBL2P11226 248 aaPredicted RBP11.76□□□□□ -0.53
HERC1-204ENST00000559715 ENGP17813 658 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 ITPKAP23677 461 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 ATICP31939 592 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 TUBP50607 506 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 CYP2J2P51589 502 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 SNRPFP62306 86 aaKnown RBP11.76□□□□□ -0.53
HERC1-204ENST00000559715 FAM193AP78312 1265 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 FOXC1Q12948 553 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 NUMA1Q14980 2115 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 TRIM61Q5EBN2 209 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 UNC13DQ70J99 1090 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 NELFCDQ8IXH7 590 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 NAT16Q8N8M0 369 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 DEFB124Q8NES8 71 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 KCNV2Q8TDN2 545 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 WHAMMQ8TF30 809 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 DHX58Q96C10 678 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 SCNM1Q9BWG6 230 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
HERC1-204ENST00000559715 ZSCAN16Q9H4T2 348 aaPredicted RBP11.76□□□□□ -0.53
HERC1-204ENST00000559715 OSER1Q9NX31 292 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 GMIPQ9P107 970 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 TBC1D14Q9P2M4 693 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
HERC1-204ENST00000559715 HMGXB4Q9UGU5 601 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 SETXQ7Z333 2677 aaKnown RBP11.76□□□□□ -0.53
HERC1-204ENST00000559715 PTPRBP23467 1997 aa11.76□□□□□ -0.53
HERC1-204ENST00000559715 CFAP46Q8IYW2 2715 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 FAM221BA6H8Z2 402 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 LRRIQ3A6PVS8 624 aaPredicted RBP11.75□□□□□ -0.53
HERC1-204ENST00000559715 A8MXQ7 604 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 PRRT4C9JH25 899 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 STX6O43752 255 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 RTN3O95197 1032 aaPredicted RBP11.75□□□□□ -0.53
HERC1-204ENST00000559715 CISD3P0C7P0 127 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 HOXB3P14651 431 aaPredicted RBP11.75□□□□□ -0.53
HERC1-204ENST00000559715 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
HERC1-204ENST00000559715 SLC5A3P53794 718 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 ASIC1P78348 528 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 DLG4P78352 724 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 GAD2Q05329 585 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 IFRD2Q12894 506 aaPredicted RBP11.75□□□□□ -0.53
HERC1-204ENST00000559715 CUL4BQ13620 913 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 EOGTQ5NDL2 527 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 HECTD3Q5T447 861 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 KIAA1211LQ6NV74 962 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 STXBP4Q6ZWJ1 553 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 ARMCX6Q7L4S7 300 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 LPCAT2Q7L5N7 544 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 GPRIN1Q7Z2K8 1008 aa11.75□□□□□ -0.53
HERC1-204ENST00000559715 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms