RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 CNPY3Q9BT09 278 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 ZWILCHQ9H900 591 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 PNPLA8Q9NP80 782 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 NGRNQ9NPE2 291 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 YBX2Q9Y2T7 364 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 TCRBV7S2A1N4TA0A589 114 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 CCDC66A2RUB6 948 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 PI4K2BG5E9Z4 385 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 TEX28O15482 410 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 SDC4P31431 198 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 SCNN1AP37088 669 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 HDAC4P56524 1084 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 SNX16P57768 344 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 ERVFC1P60507 584 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 YWHAZP63104 245 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 C2orf54Q08AI8 447 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 VSTM1Q6UX27 236 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 ADAT2Q7Z6V5 191 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 NOA1Q8NC60 698 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 SPPL2BQ8TCT7 592 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 GIPC2Q8TF65 315 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 SLC2A13Q96QE2 648 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 MTIF3Q9H2K0 278 aaKnown RBP18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 NR2E1Q9Y466 385 aa18.14■□□□□ 0.49
CHRNA3-206ENST00000559658 REV3LO60673 3130 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 FBXO21O94952 628 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 BMPR1AP36894 532 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 DCAF6Q58WW2 860 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 EFHC1Q5JVL4 640 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 PM20D1Q6GTS8 502 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 SCD5Q86SK9 330 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 RHOT1Q8IXI2 618 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 ZDHHC14Q8IZN3 488 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 UBL4BQ8N7F7 174 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 MAGEB5Q9BZ81 275 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 CARD9Q9H257 536 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 NMUR1Q9HB89 426 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 OSER1Q9NX31 292 aa18.13■□□□□ 0.49
CHRNA3-206ENST00000559658 SYNJ2BP-COX16A0A087WUM0 186 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 HIDE1A8MVS5 230 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 TRIM66O15016 1216 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 PSTPIP1O43586 416 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 TADA3O75528 432 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 ABLIM3O94929 683 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 LTFP02788 710 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 CNPP09543 421 aaKnown RBP18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 SPATA31D3P0C874 917 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 CTSAP10619 480 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 MATKP42679 507 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 SPATA31D4Q6ZUB0 917 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 MYRIPQ8NFW9 859 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 RAPGEF5Q92565 580 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 DDX23Q9BUQ8 820 aaKnown RBP18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 TMPRSS4Q9NRS4 437 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 MRPL17Q9NRX2 175 aaKnown RBP18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 GPATCH2LQ9NWQ4 482 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 COX16Q9P0S2 106 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 FGGP02679 453 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 PTPN9P43378 593 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 SULT1E1P49888 294 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 RWDD2BP57060 319 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 KRT17Q04695 432 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 RASGEF1CQ8N431 466 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 ZNF461Q8TAF7 563 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 AP1M1Q9BXS5 423 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 EPC1Q9H2F5 836 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 POPDC2Q9HBU9 364 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 RBM12Q9NTZ6 932 aaKnown RBP18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 NUDT5Q9UKK9 219 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 NR2E3Q9Y5X4 410 aa18.12■□□□□ 0.49
CHRNA3-206ENST00000559658 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 KRT1P04264 644 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 CD48P09326 243 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 NCAM1P13591 858 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 MRPS25P82663 173 aaKnown RBP18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 CAMK1Q14012 370 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 CCDC181Q5TID7 509 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 PLPP4Q5VZY2 271 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 BSPRYQ5W0U4 402 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 NUP93Q8N1F7 819 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 MNS1Q8NEH6 495 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 RNF25Q96BH1 459 aaPredicted RBP18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 PBKQ96KB5 322 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 NPY6RQ99463 290 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 TCF25Q9BQ70 676 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 OXCT2Q9BYC2 517 aaPredicted RBP18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 CERS4Q9HA82 394 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 ASNSD1Q9NWL6 643 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 GMIPQ9P107 970 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 USP18Q9UMW8 372 aa18.11■□□□□ 0.49
CHRNA3-206ENST00000559658 SZT2Q5T011 3432 aa18.1■□□□□ 0.49
CHRNA3-206ENST00000559658 A0A1W2PQH9 124 aa18.1■□□□□ 0.49
CHRNA3-206ENST00000559658 GRM6O15303 877 aa18.1■□□□□ 0.49
CHRNA3-206ENST00000559658 CAPN15O75808 1086 aa18.1■□□□□ 0.49
CHRNA3-206ENST00000559658 TRUB2O95900 331 aaKnown RBP18.1■□□□□ 0.49
CHRNA3-206ENST00000559658 ATF2P15336 505 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms