RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 LSMEM2Q8N112 164 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 SIPA1Q96FS4 1042 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 FUBP3Q96I24 572 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMAD3-211ENST00000559460 ACBD6Q9BR61 282 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 ARHGAP9Q9BRR9 750 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 DPH1Q9BZG8 443 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 PCED1AQ9H1Q7 454 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 SPHK2Q9NRA0 654 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 DDX43Q9NXZ2 648 aaKnown RBP10.34□□□□□ -0.75
SMAD3-211ENST00000559460 GTF3C4Q9UKN8 822 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 DERAQ9Y315 318 aa10.34□□□□□ -0.75
SMAD3-211ENST00000559460 PIEZO2Q9H5I5 2752 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ANO9A1A5B4 782 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 HNRNPDLO14979 420 aaKnown RBP10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ACAT1P24752 427 aaKnown RBP10.33□□□□□ -0.76
SMAD3-211ENST00000559460 PCSK1P29120 753 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 PNPLA4P41247 253 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ACADVLP49748 655 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 TPMTP51580 245 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ZNF132P52740 706 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 EVCP57679 992 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ILKQ13418 452 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 E2F5Q15329 346 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 FUT11Q495W5 492 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 FBXL19Q6PCT2 694 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 KDM7AQ6ZMT4 941 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 DENND5BQ6ZUT9 1274 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 FAM124AQ86V42 546 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 TSC1Q92574 1164 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ZNF274Q96GC6 653 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-211ENST00000559460 SLITRK1Q96PX8 696 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 TIPINQ9BVW5 301 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 ACE2Q9BYF1 805 aaPredicted RBP10.33□□□□□ -0.76
SMAD3-211ENST00000559460 CCSER1Q9C0I3 900 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 TM9SF3Q9HD45 589 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 DDX19AQ9NUU7 478 aaKnown RBP10.33□□□□□ -0.76
SMAD3-211ENST00000559460 KCNK4Q9NYG8 393 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 KIAA1024Q9UPX6 916 aa10.33□□□□□ -0.76
SMAD3-211ENST00000559460 NEDD8-MDP1E9PL57 170 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
SMAD3-211ENST00000559460 YKT6O15498 198 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 PAPSS1O43252 624 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-211ENST00000559460 OR52Z1P0C646 297 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 MYF5P13349 255 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 SERINC3Q13530 473 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 UBAP2LQ14157 1087 aaKnown RBP10.32□□□□□ -0.76
SMAD3-211ENST00000559460 KIAA1614Q5VZ46 1190 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 CACUL1Q86Y37 369 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 GATAD2AQ86YP4 633 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 UCMAQ8WVF2 138 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 SPATA17Q96L03 361 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 CEP295NLQ96MC4 621 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 MSTO1Q9BUK6 570 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 NACA2Q9H009 215 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 RNF38Q9H0F5 515 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 THSD1Q9NS62 852 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 GJB4Q9NTQ9 266 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 DPP3Q9NY33 737 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 MAGEC2Q9UBF1 373 aaPredicted RBP10.32□□□□□ -0.76
SMAD3-211ENST00000559460 ADAMTS1Q9UHI8 967 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 DNM3Q9UQ16 869 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 STON1Q9Y6Q2 735 aa10.32□□□□□ -0.76
SMAD3-211ENST00000559460 A0A1B0GTQ1 180 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 ZNF840PA6NDX5 716 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 SFI1A8K8P3 1242 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 KCNJ18B7U540 433 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 CBX4O00257 560 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 TRIM66O15016 1216 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 AFPP02771 609 aaKnown RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 MAPTP10636 758 aaKnown RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 PLS3P13797 630 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 MAGEA11P43364 429 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 DGKGP49619 791 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 IFRD2Q12894 506 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 TRIM29Q14134 588 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 MAPRE1Q15691 268 aaKnown RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 SGO2Q562F6 1265 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 TDRD10Q5VZ19 366 aaKnown RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 LAYNQ6UX15 382 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 VSTM1Q6UX27 236 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 CCDC81Q6ZN84 652 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 TMPRSS6Q8IU80 811 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 TMEM86AQ8N2M4 240 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 PDCL2Q8N4E4 241 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 EID2Q8N6I1 236 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 SNX29Q8TEQ0 813 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 CCDC97Q96F63 343 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 MMS19Q96T76 1030 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 ELF4Q99607 663 aaPredicted RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 BBS2Q9BXC9 721 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 RAB34Q9BZG1 259 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 TMEM60Q9H2L4 133 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 ASB7Q9H672 318 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 OSGEPQ9NPF4 335 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■■■ 334.2
SMAD3-211ENST00000559460 R3HCC1Q9Y3T6 440 aaKnown RBP10.31□□□□□ -0.76
SMAD3-211ENST00000559460 C2CD2Q9Y426 696 aa10.31□□□□□ -0.76
SMAD3-211ENST00000559460 SNX14Q9Y5W7 946 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms