RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NUDT22Q9BRQ3 303 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 ZNF703Q9H7S9 590 aaPredicted RBP12.7□□□□□ -0.38
CASC4-208ENST00000559151 PRDM16Q9HAZ2 1276 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 PDP2Q9P2J9 529 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 ZNF69Q9UC07 566 aa12.7□□□□□ -0.38
CASC4-208ENST00000559151 FAM90A18PA6NE21 464 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 FAM90A16PA6NEW6 464 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 FAM90A9PA6NNJ1 464 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 FAM90A5PA8MXJ8 464 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 H0Y3Z8 333 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 PPP6R2O75170 966 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 FAM90A15PP0C7V4 464 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 FAM90A14PP0C7W9 464 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 JUPP14923 745 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 CNTFP26441 200 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 CLCN2P51788 898 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 GUCY1B3Q02153 619 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 SYNE4Q8N205 404 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 TEX19Q8NA77 164 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 SUPT20HQ8NEM7 779 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 AFG1LQ8WV93 481 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 THAP4Q8WY91 577 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 SEPSECSQ9HD40 501 aaKnown RBP12.69□□□□□ -0.38
CASC4-208ENST00000559151 GGA3Q9NZ52 723 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
CASC4-208ENST00000559151 A1L4Q6 167 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 EXOC5O00471 708 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 ITIH3Q06033 890 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 TRIM60Q495X7 471 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 SPDYAQ5MJ70 313 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 CAND1Q86VP6 1230 aaKnown RBP12.68□□□□□ -0.38
CASC4-208ENST00000559151 TTC30AQ86WT1 665 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 HERC6Q8IVU3 1022 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 TOR1AIP2Q8NFQ8 470 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 WDR60Q8WVS4 1066 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 ELAC1Q9H777 363 aaKnown RBP12.68□□□□□ -0.38
CASC4-208ENST00000559151 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
CASC4-208ENST00000559151 EYA2O00167 538 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 RPP40O75818 363 aaKnown RBP12.67□□□□□ -0.38
CASC4-208ENST00000559151 WDR47O94967 919 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 CLCA4Q14CN2 919 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 TIGD2Q4W5G0 525 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 NFRKBQ6P4R8 1299 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 LRRTM4Q86VH4 590 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 R3HDM4Q96D70 268 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 VPS16Q9H269 839 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 TBCCD1Q9NVR7 557 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 STEAP1Q9UHE8 339 aa12.67□□□□□ -0.38
CASC4-208ENST00000559151 CENPVL1A0A0U1RR11 272 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 A0A1B0GVC2 190 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 SLC16A3O15427 465 aaKnown RBP12.66□□□□□ -0.38
CASC4-208ENST00000559151 POLBP06746 335 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 PBX1P40424 430 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 CSHL1Q14406 222 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 ACOX1Q15067 660 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 P3H1Q32P28 736 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 TMEM196Q5HYL7 178 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 SIMC1Q8NDZ2 872 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 OR6Y1Q8NGX8 325 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 ASB10Q8WXI3 467 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 FKBP10Q96AY3 582 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 C3orf49Q96BT1 292 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 RIC8AQ9NPQ8 531 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 CNOT11Q9UKZ1 510 aaKnown RBP12.66□□□□□ -0.38
CASC4-208ENST00000559151 CNTN6Q9UQ52 1028 aa12.66□□□□□ -0.38
CASC4-208ENST00000559151 CER1O95813 267 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 C1SP09871 688 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 LIPAP38571 399 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 ADAM17P78536 824 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 MTAPQ13126 283 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 FZD5Q13467 585 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 TBCCQ15814 346 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 NRN1LQ496H8 165 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 MSANTD2Q6P1R3 559 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 VWA1Q6PCB0 445 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 TTLL10Q6ZVT0 673 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 LNX2Q8N448 690 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 ASB12Q8WXK4 309 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 MCRS1Q96EZ8 462 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 TESQ9UGI8 421 aaKnown RBP12.65□□□□□ -0.38
CASC4-208ENST00000559151 CRYL1Q9Y2S2 319 aa12.65□□□□□ -0.38
CASC4-208ENST00000559151 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 PRKCBP05771 671 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 FESP07332 822 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 ITGAMP11215 1152 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 PAPOLAP51003 745 aaKnown RBP12.64□□□□□ -0.39
CASC4-208ENST00000559151 NXPH1P58417 271 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 CDSNQ15517 529 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 TREML2Q5T2D2 321 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 CPOQ8IVL8 374 aa12.64□□□□□ -0.39
CASC4-208ENST00000559151 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms