RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 RNF168Q8IYW5 571 aaPredicted RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 TTC39CQ8N584 583 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 BAP1Q92560 729 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 BADQ92934 168 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 GDAP1L1Q96MZ0 367 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 BARD1Q99728 777 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 TCHPQ9BT92 498 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 NUP58Q9BVL2 599 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 BCO2Q9BYV7 579 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 XYLT2Q9H1B5 865 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 PDE11AQ9HCR9 933 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 GDAP2Q9NXN4 497 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 RRN3Q9NYV6 651 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 SCHIP1Q9P0W5 487 aaPredicted RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 STK39Q9UEW8 545 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 SIX4Q9UIU6 781 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 TSR3Q9UJK0 312 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 MSRB2Q9Y3D2 182 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 MTCH2Q9Y6C9 303 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 MUSKO15146 869 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PLOD3O60568 738 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 SRGAP2O75044 1071 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 B3GALNT1O75752 331 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 DKK1O94907 266 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 C1RP00736 705 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 LINC00271P0C7V0 271 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 HNRNPH3P31942 346 aaKnown RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 HOXD12P35452 270 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 EPHB4P54760 987 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 JAM2P57087 298 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 RBP5P82980 135 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ZXDAP98168 799 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 GCNT1Q02742 428 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PPARDQ03181 441 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ITKQ08881 620 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 TUSC3Q13454 348 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 SMC1AQ14683 1233 aaKnown RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CBWD6Q4V339 395 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CBWD3Q5JTY5 395 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ZNF569Q5MCW4 686 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CBWD5Q5RIA9 395 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 C9orf57Q5W0N0 161 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 GLB1LQ6UWU2 654 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 TRAPPC11Q7Z392 1133 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 THNSL1Q8IYQ7 743 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 C1orf127Q8N9H9 656 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 FBXL13Q8NEE6 735 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 OR5B17Q8NGF7 314 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 URGCPQ8TCY9 931 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ANKRD49Q8WVL7 239 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 SYN2Q92777 582 aaPredicted RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ANKRD36BP1Q96IX9 119 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ALPK1Q96QP1 1244 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 INTS2Q9H0H0 1204 aaKnown RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PLEKHA4Q9H4M7 779 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CWH43Q9H720 699 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CYP3A43Q9HB55 503 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 MIOSQ9NXC5 875 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 MCM8Q9UJA3 840 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PHTF1Q9UMS5 762 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 GINS2Q9Y248 185 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PCDHB7Q9Y5E2 793 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 OBSL1O75147 1896 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ATP8B3O60423 1300 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 AKR1B15C9JRZ8 316 aaPredicted RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 M0QZQ0 153 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 SASH3O75995 380 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 NOL4O94818 638 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 KIAA0754O94854 1291 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 HLA-DRAP01903 254 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CYP11A1P05108 521 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 THP07101 528 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 RHOXF2BP0C7M4 288 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 TRIM49P0CI25 452 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 TRIM49CP0CI26 452 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 SYN1P17600 705 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PON1P27169 355 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ANXA13P27216 316 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 GNA15P30679 374 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CD86P42081 329 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 MATR3P43243 847 aaKnown RBP eCLIP4.3□□□□□ -1.723e-6■■■□□ 19
ZEB1-212ENST00000558655 LIMK1P53667 647 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 MRPS35P82673 323 aaKnown RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 CDK17Q00537 523 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PLCB3Q01970 1234 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 UBXN1Q04323 297 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ZP2Q05996 745 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 INCA1Q0VD86 236 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 GRM3Q14832 879 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 MEA1Q16626 185 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 UPP1Q16831 310 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 SGSM1Q2NKQ1 1148 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 DCLRE1AQ6PJP8 1040 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ZNF365Q70YC5 407 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 ZNF771Q7L3S4 317 aaPredicted RBP4.3□□□□□ -1.72
ZEB1-212ENST00000558655 PPFIBP1Q86W92 1011 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 DNAAF5Q86Y56 855 aa4.3□□□□□ -1.72
ZEB1-212ENST00000558655 LRRC43Q8N309 656 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms