RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 IER2Q9BTL4 223 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 NACA2Q9H009 215 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 RNF38Q9H0F5 515 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 LRRC4Q9HBW1 653 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 LTB4R2Q9NPC1 389 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 DUS2Q9NX74 493 aaKnown RBP8.94□□□□□ -0.98
TPM1-213ENST00000558400 CLIC5Q9NZA1 410 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 TSPAN16Q9UKR8 245 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 CNTN6Q9UQ52 1028 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 CCL26Q9Y258 94 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 NFE2L3Q9Y4A8 694 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 PIAS3Q9Y6X2 628 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 ACACBO00763 2458 aa8.94□□□□□ -0.98
TPM1-213ENST00000558400 E2F8A0AVK6 867 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 KCNJ18B7U540 433 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 O00370 1275 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 PES1O00541 588 aaKnown RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 PI15O43692 258 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 TLR5O60602 858 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 MBL2P11226 248 aaPredicted RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 KRT5P13647 590 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 SLC9A1P19634 815 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 CDK11BP21127 795 aaKnown RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 PON1P27169 355 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 IFNAR2P48551 515 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 BPIFB4P59827 614 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 COG7P83436 770 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 KCNJ12Q14500 433 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 GSE1Q14687 1217 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 UBXN2BQ14CS0 331 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 ZNF77Q15935 545 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 MEA1Q16626 185 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 RAB41Q5JT25 222 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 DGKKQ5KSL6 1271 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 CWF19L1Q69YN2 538 aaKnown RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 PM20D1Q6GTS8 502 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 PIGZQ86VD9 579 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 CCDC105Q8IYK2 499 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 ADGRG2Q8IZP9 1017 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 SCML4Q8N228 414 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 SYNPOQ8N3V7 929 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 CPA6Q8N4T0 437 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 DTWD2Q8NBA8 298 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 RBBP8NLQ8NC74 664 aaPredicted RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 CCDC26Q8TAB7 109 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 KCTD13Q8WZ19 329 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 ATP2A3Q93084 1043 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 HSFY1Q96LI6 401 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 CRACR2AQ9BSW2 395 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 SMG9Q9H0W8 520 aaKnown RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 CYLDQ9NQC7 956 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 SAMSN1Q9NSI8 373 aaKnown RBP8.93□□□□□ -0.98
TPM1-213ENST00000558400 GTSE1Q9NYZ3 720 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 DNMT3LQ9UJW3 386 aa8.93□□□□□ -0.98
TPM1-213ENST00000558400 MAP1BP46821 2468 aaKnown RBP8.92□□□□□ -0.98
TPM1-213ENST00000558400 LRRC10BA6NIK2 292 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 SMTNL1A8MU46 457 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 SPECC1L-ADORA2AF8WAN1 911 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 RNF225M0QZC1 329 aaPredicted RBP8.92□□□□□ -0.98
TPM1-213ENST00000558400 LEFTY2O00292 366 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 COCHO43405 550 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 NFATC1O95644 943 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ZBED1O96006 694 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 CD72P21854 359 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 CTHP32929 405 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ACADSBP45954 432 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 TKTL1P51854 596 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ZNF132P52740 706 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 SNX16P57768 344 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 MYL5Q02045 173 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 PTK2Q05397 1052 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 PDE4CQ08493 712 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 USP4Q13107 963 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 LRRC32Q14392 662 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 PPP2R5DQ14738 602 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 GOLGA7BQ2TAP0 167 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 KLHL40Q2TBA0 621 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 SKOR2Q2VWA4 1001 aaPredicted RBP8.92□□□□□ -0.98
TPM1-213ENST00000558400 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 FKBP15Q5T1M5 1219 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 TTC30AQ86WT1 665 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 C1orf210Q8IVY1 113 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ARHGEF19Q8IW93 802 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 SLC35F5Q8WV83 523 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ZNF606Q8WXB4 792 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ZFYVE19Q96K21 471 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 KREMEN1Q96MU8 473 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 EBF3Q9H4W6 596 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 ECT2Q9H8V3 914 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 LMAN1LQ9HAT1 526 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 CNGB3Q9NQW8 809 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 OLA1Q9NTK5 396 aaKnown RBP8.92□□□□□ -0.98
TPM1-213ENST00000558400 GMIPQ9P107 970 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 NAGPAQ9UK23 515 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.92□□□□□ -0.98
TPM1-213ENST00000558400 ZNF510Q9Y2H8 683 aa8.92□□□□□ -0.98
TPM1-213ENST00000558400 SH3BP1Q9Y3L3 701 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms