RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 LRMPQ12912 555 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 CCDC40Q4G0X9 1142 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 C2orf27AQ580R0 203 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 SNX30Q5VWJ9 437 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 LAIR1Q6GTX8 287 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 RHBDF2Q6PJF5 856 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 WDR5BQ86VZ2 330 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 C12orf40Q86WS4 652 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 SFTPA1Q8IWL2 248 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 BBS7Q8IWZ6 715 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 ZC3H3Q8IXZ2 948 aaKnown RBP12.58□□□□□ -0.4
HERC1-202ENST00000558324 ADGRG2Q8IZP9 1017 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 OSER1Q9NX31 292 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 TBC1D14Q9P2M4 693 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 CTNND2Q9UQB3 1225 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 SCML2Q9UQR0 700 aa12.58□□□□□ -0.4
HERC1-202ENST00000558324 RIF1Q5UIP0 2472 aaKnown RBP12.57□□□□□ -0.4
HERC1-202ENST00000558324 PTPRZ1P23471 2315 aaPredicted RBP12.57□□□□□ -0.4
HERC1-202ENST00000558324 MYO16Q9Y6X6 1858 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 A0A1W2PQH9 124 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 CCDC192P0DO97 292 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 HOXA6P31267 233 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 CNR2P34972 360 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 RAD23BP54727 409 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 MESP2Q0VG99 397 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 CUL2Q13617 745 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 DMC1Q14565 340 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 LY6G5CQ5SRR4 150 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 CCDC33Q8N5R6 958 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
HERC1-202ENST00000558324 NAT16Q8N8M0 369 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 SLC4A11Q8NBS3 891 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 SLC35C1Q96A29 364 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 ACDQ96AP0 544 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 TMEM176AQ96HP8 235 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 DHTKD1Q96HY7 919 aaPredicted RBP12.57□□□□□ -0.4
HERC1-202ENST00000558324 DUSP16Q9BY84 665 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 GTPBP4Q9BZE4 634 aaKnown RBP12.57□□□□□ -0.4
HERC1-202ENST00000558324 NMUR1Q9HB89 426 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 PARD6AQ9NPB6 346 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 ZDHHC4Q9NPG8 344 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 NAGPAQ9UK23 515 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 GVINP1Q7Z2Y8 2422 aa12.57□□□□□ -0.4
HERC1-202ENST00000558324 GPR179Q6PRD1 2367 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 K7EQS6 105 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 RPP40O75818 363 aaKnown RBP12.56□□□□□ -0.4
HERC1-202ENST00000558324 APBB3O95704 486 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 RARGP13631 454 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 CD19P15391 556 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 BMP6P22004 513 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 ATP5C1P36542 298 aaKnown RBP12.56□□□□□ -0.4
HERC1-202ENST00000558324 KIF11P52732 1056 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 STX17P56962 302 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 MCCD1P59942 119 aaPredicted RBP12.56□□□□□ -0.4
HERC1-202ENST00000558324 GOLGA7BQ2TAP0 167 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 ANO4Q32M45 955 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 C10orf120Q5SQS8 335 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 SYT13Q7L8C5 426 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 TTC30AQ86WT1 665 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 TTC39CQ8N584 583 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 KIAA1958Q8N8K9 716 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 USP33Q8TEY7 942 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 GAB3Q8WWW8 586 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 NELFBQ8WX92 580 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 PNKPQ96T60 521 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 DUSP9Q99956 384 aaKnown RBP12.56□□□□□ -0.4
HERC1-202ENST00000558324 PNPLA8Q9NP80 782 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 ARHGEF4Q9NR80 690 aa12.56□□□□□ -0.4
HERC1-202ENST00000558324 OTOGLQ3ZCN5 2332 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 AXIN1O15169 862 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 KAT7O95251 611 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 APODP05090 189 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 RETP07949 1114 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 TIE1P35590 1138 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 FMO5P49326 533 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 GAD2Q05329 585 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 GOLGA8FQ08AF8 430 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 GOLGA8DPQ0D2H9 430 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 RSPO4Q2I0M5 234 aaPredicted RBP12.55□□□□□ -0.4
HERC1-202ENST00000558324 BTBD8Q5XKL5 378 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 TTI2Q6NXR4 508 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 CCDC186Q7Z3E2 898 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 KBTBD6Q86V97 674 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 TMEM25Q86YD3 366 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 MIB1Q86YT6 1006 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 ELOA2Q8IYF1 753 aaPredicted RBP12.55□□□□□ -0.4
HERC1-202ENST00000558324 CAMKK1Q8N5S9 505 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 ALLCQ8N6M5 410 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 TSTD1Q8NFU3 115 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 CCDC26Q8TAB7 109 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 OTUB2Q96DC9 234 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 CEP63Q96MT8 703 aa12.55□□□□□ -0.4
HERC1-202ENST00000558324 KLF16Q9BXK1 252 aaPredicted RBP12.55□□□□□ -0.4
HERC1-202ENST00000558324 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
HERC1-202ENST00000558324 SPHK2Q9NRA0 654 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms