RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 CD72P21854 359 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 WEE1P30291 646 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 PLA2G4AP47712 749 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 KLK7P49862 253 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 TUBP50607 506 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 KIF11P52732 1056 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 BPIFB4P59827 614 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 POLR2FP61218 127 aaKnown RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 YWHAGP61981 247 aaKnown RBP eCLIP9.44□□□□□ -0.9
SPG11-207ENST00000558138 AMPD2Q01433 879 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 TNK2Q07912 1038 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 FCHO2Q0JRZ9 810 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 EFEMP1Q12805 493 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 USP4Q13107 963 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 NR1H3Q13133 447 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 DRAP1Q14919 205 aaPredicted RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 PDGFRLQ15198 375 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 NFKBIBQ15653 356 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 ZNF77Q15935 545 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 ITPRIPL2Q3MIP1 535 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 KLHDC7AQ5VTJ3 777 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 ASTLQ6HA08 431 aaPredicted RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 DENND1BQ6P3S1 775 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 MIB1Q86YT6 1006 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 DHX40Q8IX18 779 aaKnown RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 FAM3CQ92520 227 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 ATP2A3Q93084 1043 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 FAM149B1Q96BN6 582 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 NOX5Q96PH1 765 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 UBXN6Q9BZV1 441 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 FOXQ1Q9C009 403 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 MIS12Q9H081 205 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 RNF38Q9H0F5 515 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 EBF3Q9H4W6 596 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 C8orf33Q9H7E9 229 aaPredicted RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 SIX2Q9NPC8 291 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 NLRC4Q9NPP4 1024 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 SEPT11Q9NVA2 429 aaKnown RBP9.44□□□□□ -0.9
SPG11-207ENST00000558138 GTSE1Q9NYZ3 720 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 DNMT3LQ9UJW3 386 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 NUDT5Q9UKK9 219 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 SIT1Q9Y3P8 196 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 NCANO14594 1321 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 PATJQ8NI35 1801 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 TICRRQ7Z2Z1 1910 aa9.44□□□□□ -0.9
SPG11-207ENST00000558138 KANSL1LA0AUZ9 987 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 FAM170AA1A519 330 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 FAM170BA6NMN3 283 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
SPG11-207ENST00000558138 CAPN9O14815 690 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 MDM4O15151 490 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 GFPT2O94808 682 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 NFATC1O95644 943 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 CAVIN2O95810 425 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 DCNP07585 359 aaKnown RBP9.43□□□□□ -0.9
SPG11-207ENST00000558138 ATP1A3P13637 1013 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 ARSAP15289 507 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 COL9A1P20849 921 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 ACADSBP45954 432 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 SOX9P48436 509 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 ZNF132P52740 706 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 SNX16P57768 344 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 SLC7A9P82251 487 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 KCNMA1Q12791 1236 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 RUNX3Q13761 415 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 NCAPHQ15003 741 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 TAF3Q5VWG9 929 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 C1orf228Q6PIY5 440 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 CCDC186Q7Z3E2 898 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 BMP8AQ7Z5Y6 402 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 LUZP1Q86V48 1076 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 MSANTD4Q8NCY6 345 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 OSCP1Q8WVF1 389 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 ZNF606Q8WXB4 792 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 SHC3Q92529 594 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 NDRG1Q92597 394 aaKnown RBP9.43□□□□□ -0.9
SPG11-207ENST00000558138 EDEM1Q92611 657 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 MSANTD3Q96H12 275 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 STK33Q9BYT3 514 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 TSPY26PQ9H489 355 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 NMUR1Q9HB89 426 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 CBX8Q9HC52 389 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 ACP6Q9NPH0 428 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 CNGB3Q9NQW8 809 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 AJAP1Q9UKB5 411 aaPredicted RBP9.43□□□□□ -0.9
SPG11-207ENST00000558138 TECTAO75443 2155 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 HELZP42694 1942 aaKnown RBP9.43□□□□□ -0.9
SPG11-207ENST00000558138 ANAPC1Q9H1A4 1944 aa9.43□□□□□ -0.9
SPG11-207ENST00000558138 SLC12A8A0AV02 714 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 FAM92AA1XBS5 289 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 F8VZ95 297 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 SPECC1L-ADORA2AF8WAN1 911 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
SPG11-207ENST00000558138 FBXO21O94952 628 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 TBX18O95935 607 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 ZNF18P17022 549 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 AOC1P19801 751 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 STAT1P42224 750 aa9.42□□□□□ -0.9
SPG11-207ENST00000558138 CLCN5P51795 746 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms