RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TKTL1P51854 596 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 AMPD2Q01433 879 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 GOLGA8FQ08AF8 430 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 GOLGA8DPQ0D2H9 430 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 KCNMA1Q12791 1236 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 RUNX3Q13761 415 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 NCAPHQ15003 741 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 KLHDC10Q6PID8 442 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 RALGPS2Q86X27 583 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-209ENST00000557342 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 PJA1Q8NG27 643 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 FAM3CQ92520 227 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 ATP2A3Q93084 1043 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 HSFY1Q96LI6 401 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 LTB4R2Q9NPC1 389 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 DUS2Q9NX74 493 aaKnown RBP13.14□□□□□ -0.31
SLIRP-209ENST00000557342 GTSE1Q9NYZ3 720 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 CLIC5Q9NZA1 410 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 NAGPAQ9UK23 515 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 DAAM1Q9Y4D1 1078 aa13.14□□□□□ -0.31
SLIRP-209ENST00000557342 ARIH1Q9Y4X5 557 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-209ENST00000557342 COL4A3Q01955 1670 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 BECN2A8MW95 431 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 THAP12O43422 761 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 ZBED1O96006 694 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 RARGP13631 454 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 ZNF18P17022 549 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 MAGEA9P43362 315 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 ZNF165P49910 485 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 COPB1P53618 953 aaKnown RBP13.13□□□□□ -0.31
SLIRP-209ENST00000557342 BPIFB4P59827 614 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 APBA1Q02410 837 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 PTK2Q05397 1052 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 NR1H3Q13133 447 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 UBXN2BQ14CS0 331 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 KLHDC7AQ5VTJ3 777 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 PM20D1Q6GTS8 502 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 SCML4Q8N228 414 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 CPA6Q8N4T0 437 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 SLC35F5Q8WV83 523 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 ZNF606Q8WXB4 792 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 SECISBP2LQ93073 1101 aaKnown RBP13.13□□□□□ -0.31
SLIRP-209ENST00000557342 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 FUCA2Q9BTY2 467 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
SLIRP-209ENST00000557342 FOXQ1Q9C009 403 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 EBF3Q9H4W6 596 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 PLCB1Q9NQ66 1216 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 CNGB3Q9NQW8 809 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
SLIRP-209ENST00000557342 SMPD4Q9NXE4 827 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 TBC1D14Q9P2M4 693 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 DNMT3LQ9UJW3 386 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 SH3BP1Q9Y3L3 701 aa13.13□□□□□ -0.31
SLIRP-209ENST00000557342 E2F8A0AVK6 867 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 SYCE3A1L190 88 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 LRRC10BA6NIK2 292 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 LGALS16A8MUM7 142 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 SPECC1L-ADORA2AF8WAN1 911 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 TULP2O00295 520 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 PI15O43692 258 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 NFATC1O95644 943 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 UCHL3P15374 230 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 CTHP32929 405 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 YWHAGP61981 247 aaKnown RBP eCLIP13.12□□□□□ -0.31
SLIRP-209ENST00000557342 ZXDBP98169 803 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 TNK2Q07912 1038 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 ADIGQ0VDE8 80 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 RAPGEF1Q13905 1077 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 EML3Q32P44 896 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 TRIM68Q6AZZ1 485 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 DPY19L2P1Q6NXN4 242 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 NMUR1Q9HB89 426 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 OSER1Q9NX31 292 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 CFAP97Q9P2B7 532 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 WNT6Q9Y6F9 365 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 TRIOO75962 3097 aa13.12□□□□□ -0.31
SLIRP-209ENST00000557342 FOXN3O00409 490 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-209ENST00000557342 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
SLIRP-209ENST00000557342 FBXO21O94952 628 aa13.11□□□□□ -0.31
SLIRP-209ENST00000557342 CAVIN2O95810 425 aa13.11□□□□□ -0.31
SLIRP-209ENST00000557342 CALCAP01258 141 aa13.11□□□□□ -0.31
SLIRP-209ENST00000557342 DCNP07585 359 aaKnown RBP13.11□□□□□ -0.31
SLIRP-209ENST00000557342 LCP1P13796 627 aa13.11□□□□□ -0.31
SLIRP-209ENST00000557342 ARSAP15289 507 aa13.11□□□□□ -0.31
SLIRP-209ENST00000557342 CD72P21854 359 aa13.11□□□□□ -0.31
SLIRP-209ENST00000557342 TARSP26639 723 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms