RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 CYLDQ9NQC7 956 aa11.25□□□□□ -0.61
LINC00239-201ENST00000556973 CLIC5Q9NZA1 410 aa11.25□□□□□ -0.61
LINC00239-201ENST00000556973 SIT1Q9Y3P8 196 aa11.25□□□□□ -0.61
LINC00239-201ENST00000556973 CPQQ9Y646 472 aa11.25□□□□□ -0.61
LINC00239-201ENST00000556973 KMT2EQ8IZD2 1858 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 A0A1W2PQH9 124 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 LGALS16A8MUM7 142 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 M0QYV0 167 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 TULP2O00295 520 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 THAP12O43422 761 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 ZBED1O96006 694 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 CALCAP01258 141 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 RALAP11233 206 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 RARGP13631 454 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 UCHL3P15374 230 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 AOC1P19801 751 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 CLCN1P35523 988 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 GPD2P43304 727 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 PGFP49763 221 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 KPNA1P52294 538 aaPredicted RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 USP4Q13107 963 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 RUNX3Q13761 415 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 IQCB1Q15051 598 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 KLHDC10Q6PID8 442 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 TPRG1Q6ZUI0 275 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 SCD5Q86SK9 330 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 FAM71AQ8IYT1 594 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 RIN3Q8TB24 985 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 OSCP1Q8WVF1 389 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 SECISBP2LQ93073 1101 aaKnown RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 HSFY1Q96LI6 401 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 CDK5RAP1Q96SZ6 601 aaKnown RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 PRRX2Q99811 253 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 LSM14BQ9BX40 385 aaKnown RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 NAA15Q9BXJ9 866 aaKnown RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 STK33Q9BYT3 514 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 KCNH6Q9H252 994 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 TBC1D17Q9HA65 648 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 CNGB3Q9NQW8 809 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 OSER1Q9NX31 292 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 DUS2Q9NX74 493 aaKnown RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 GTSE1Q9NYZ3 720 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 NAGPAQ9UK23 515 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
LINC00239-201ENST00000556973 DAAM1Q9Y4D1 1078 aa11.24□□□□□ -0.61
LINC00239-201ENST00000556973 E2F8A0AVK6 867 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 NCAM2O15394 837 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 PI15O43692 258 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ATP1A3P13637 1013 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 CD72P21854 359 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 IFNAR2P48551 515 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 YWHAGP61981 247 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC00239-201ENST00000556973 AMPD2Q01433 879 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 UBXN1Q04323 297 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 TNK2Q07912 1038 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ADIGQ0VDE8 80 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 NR1H3Q13133 447 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 RAPGEF1Q13905 1077 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 DRAP1Q14919 205 aaPredicted RBP11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ITPRIPL2Q3MIP1 535 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 FILIP1LQ4L180 1135 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 CWF19L1Q69YN2 538 aaKnown RBP11.23□□□□□ -0.61
LINC00239-201ENST00000556973 PMF1Q6P1K2 205 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 APTXQ7Z2E3 356 aaKnown RBP11.23□□□□□ -0.61
LINC00239-201ENST00000556973 RALGPS2Q86X27 583 aaPredicted RBP11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ADGRG2Q8IZP9 1017 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 SIX6OS1Q8N1H7 587 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 TMEM105Q8N8V8 129 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 TTC16Q8NEE8 873 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 PJA1Q8NG27 643 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 FAM3CQ92520 227 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ATP2A3Q93084 1043 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ULBP1Q9BZM6 244 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 EBF3Q9H4W6 596 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 NMUR1Q9HB89 426 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 ACP6Q9NPH0 428 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 SMPD4Q9NXE4 827 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 AJAP1Q9UKB5 411 aaPredicted RBP11.23□□□□□ -0.61
LINC00239-201ENST00000556973 PCDHGC3Q9UN70 934 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 SIK3Q9Y2K2 1263 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 FHOD1Q9Y613 1164 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 PIAS3Q9Y6X2 628 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
LINC00239-201ENST00000556973 TRIOO75962 3097 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 FAM170BA6NMN3 283 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 SLC9A3R1O14745 358 aaPredicted RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 GABBR2O75899 941 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 TBX18O95935 607 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 LCP1P13796 627 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 COL9A1P20849 921 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 KRT9P35527 623 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 ACADSBP45954 432 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 RPL34P49207 117 aaKnown RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 RGS7P49802 495 aa11.22□□□□□ -0.61
LINC00239-201ENST00000556973 VCPP55072 806 aaKnown RBP11.22□□□□□ -0.61
LINC00239-201ENST00000556973 TPM4P67936 248 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms