RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 STARD13Q9Y3M8 1113 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-221ENST00000556571 SRPRBQ9Y5M8 271 aaKnown RBP12.63□□□□□ -0.39
ACTN1-221ENST00000556571 ACACAQ13085 2346 aa12.63□□□□□ -0.39
ACTN1-221ENST00000556571 IGHV1OR15-9A0A0B4J2B8 117 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 A8MXQ7 604 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 COCHO43405 550 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 CST3P01034 146 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 CAPNS1P04632 268 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 HOXB2P14652 356 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 TUBP50607 506 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 CACNA2D1P54289 1103 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 TRIP6Q15654 476 aaKnown RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 ANO4Q32M45 955 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 WDR72Q3MJ13 1102 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 SNX30Q5VWJ9 437 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 TMEM25Q86YD3 366 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 CCDC65Q8IXS2 484 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 TERB1Q8NA31 727 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 FBXO32Q969P5 355 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 FAM124BQ9H5Z6 455 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 TMEM30AQ9NV96 361 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 HSPBP1Q9NZL4 362 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 SUSD2Q9UGT4 822 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 CHORDC1Q9UHD1 332 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 FBXO2Q9UK22 296 aaPredicted RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 NME7Q9Y5B8 376 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 PCDHB9Q9Y5E1 797 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 CLIC4Q9Y696 253 aa12.62□□□□□ -0.39
ACTN1-221ENST00000556571 HELZP42694 1942 aaKnown RBP12.62□□□□□ -0.39
ACTN1-221ENST00000556571 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 TNNI1P19237 187 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 STAT6P42226 847 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 WASP42768 502 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 TNNC1P63316 161 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 SYCP2LQ5T4T6 812 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 GRAMD4Q6IC98 578 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 SLC41A1Q8IVJ1 513 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 BBS7Q8IWZ6 715 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 TRIML1Q8N9V2 468 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 B3GALNT2Q8NCR0 500 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 OR2I1PQ8NGU4 316 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 ZNF419Q96HQ0 510 aaPredicted RBP12.61□□□□□ -0.39
ACTN1-221ENST00000556571 HSPA12BQ96MM6 686 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 CLIC6Q96NY7 704 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 B3GNT5Q9BYG0 378 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 DPEP3Q9H4B8 488 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 COMMD8Q9NX08 183 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 HCN2Q9UL51 889 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 CYP8B1Q9UNU6 501 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 LAMA5O15230 3695 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 APC2O95996 2303 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 ATP8B3O60423 1300 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 FREM2Q5SZK8 3169 aa12.61□□□□□ -0.39
ACTN1-221ENST00000556571 PLXND1Q9Y4D7 1925 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 ITPR1Q14643 2758 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 CLDN5O00501 218 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 SH3BP5O60239 455 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 NDUFS2O75306 463 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 GJB3O75712 270 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 DLATP10515 647 aaKnown RBP12.6□□□□□ -0.39
ACTN1-221ENST00000556571 GNSP15586 552 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 NDUFV2P19404 249 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 SCAPQ12770 1279 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
ACTN1-221ENST00000556571 PLEKHG6Q3KR16 790 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 MIB1Q86YT6 1006 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 CHPFQ8IZ52 775 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 RGL4Q8IZJ4 473 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 SCAMP5Q8TAC9 235 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 IPO4Q8TEX9 1081 aaKnown RBP12.6□□□□□ -0.39
ACTN1-221ENST00000556571 ADAMTS14Q8WXS8 1223 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 FOXJ1Q92949 421 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 XPO6Q96QU8 1125 aaKnown RBP12.6□□□□□ -0.39
ACTN1-221ENST00000556571 KCNK16Q96T55 309 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 GABRG3Q99928 467 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 BACH2Q9BYV9 841 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 NACA2Q9H009 215 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 CCSER2Q9H7U1 834 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 CD248Q9HCU0 757 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 IL37Q9NZH6 218 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 GPSM3Q9Y4H4 160 aa12.6□□□□□ -0.39
ACTN1-221ENST00000556571 TNRC6BQ9UPQ9 1833 aaKnown RBP12.6□□□□□ -0.39
ACTN1-221ENST00000556571 NBEAQ8NFP9 2946 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 FAM92AA1XBS5 289 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 TRIM24O15164 1050 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 CD2BP2O95400 341 aaKnown RBP12.59□□□□□ -0.39
ACTN1-221ENST00000556571 STAU1O95793 577 aaKnown RBP12.59□□□□□ -0.39
ACTN1-221ENST00000556571 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 FTH1P19P0C7X4 201 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 ATICP31939 592 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 SLC5A3P53794 718 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 TRPC3Q13507 836 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 PSMD6Q15008 389 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 WDR45BQ5MNZ6 344 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 EGFLAMQ63HQ2 1017 aa12.59□□□□□ -0.39
ACTN1-221ENST00000556571 HTR3DQ70Z44 454 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms