RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 FAM122AQ96E09 287 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 IRF2BPLQ9H1B7 796 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 HPS4Q9NQG7 708 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 TLR8Q9NR97 1041 aaKnown RBP12.17□□□□□ -0.46
SLIRP-205ENST00000556310 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 TSPAN16Q9UKR8 245 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 KIAA1257Q9ULG3 409 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 MTF2Q9Y483 593 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-205ENST00000556310 PCDHB4Q9Y5E5 795 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 CPQQ9Y646 472 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 CACNA1IQ9P0X4 2223 aa12.17□□□□□ -0.46
SLIRP-205ENST00000556310 SPECC1L-ADORA2AF8WAN1 911 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 LEFTY2O00292 366 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 O00370 1275 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 ARHGAP33O14559 1287 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CYP26A1O43174 497 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 COCHO43405 550 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 TLR5O60602 858 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 VDRP11473 427 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 RPS9P46781 194 aaKnown RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 SOX9P48436 509 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 IFNAR2P48551 515 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 KIF11P52732 1056 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 ZNF132P52740 706 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 ZXDBP98169 803 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 BST2Q10589 180 aaKnown RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 RUNX3Q13761 415 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CCDC183Q5T5S1 534 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 TRIM68Q6AZZ1 485 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 TRIM65Q6PJ69 517 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 RRAGAQ7L523 313 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 TTC30AQ86WT1 665 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CREBRFQ8IUR6 639 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CPA6Q8N4T0 437 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 RBBP8NLQ8NC74 664 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 TTC16Q8NEE8 873 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 ATP2A3Q93084 1043 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 FAM81BQ96LP2 452 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 KREMEN1Q96MU8 473 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 UBXN6Q9BZV1 441 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 EBF3Q9H4W6 596 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CYLDQ9NQC7 956 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 DUS2Q9NX74 493 aaKnown RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 SMPD4Q9NXE4 827 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 HESX1Q9UBX0 185 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 CHORDC1Q9UHD1 332 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 NDRG2Q9UN36 371 aaKnown RBP12.16□□□□□ -0.46
SLIRP-205ENST00000556310 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
SLIRP-205ENST00000556310 FANCMQ8IYD8 2048 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 XPO1O14980 1071 aaKnown RBP12.15□□□□□ -0.46
SLIRP-205ENST00000556310 SETSIPP0DME0 302 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 ARSAP15289 507 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 ANGPT1Q15389 498 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 STILQ15468 1287 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 EXOC3L4Q17RC7 722 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 EML3Q32P44 896 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 TXNDC11Q6PKC3 985 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 ENOSF1Q7L5Y1 443 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 PIGZQ86VD9 579 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 TTC8Q8TAM2 541 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 ENOX1Q8TC92 643 aaKnown RBP12.15□□□□□ -0.46
SLIRP-205ENST00000556310 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
SLIRP-205ENST00000556310 CRACR2AQ9BSW2 395 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 IER2Q9BTL4 223 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 CNTN6Q9UQ52 1028 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 WNT6Q9Y6F9 365 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 KIAA1549LQ6ZVL6 1849 aa12.15□□□□□ -0.46
SLIRP-205ENST00000556310 OTOL1A6NHN0 477 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-205ENST00000556310 KCNJ18B7U540 433 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 H0Y858 1186 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 SLC9A3R1O14745 358 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-205ENST00000556310 NFATC1O95644 943 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 EEF1GP26641 437 aaKnown RBP12.14□□□□□ -0.47
SLIRP-205ENST00000556310 PGFP49763 221 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 AMPD2Q01433 879 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 PDE4CQ08493 712 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 FZD5Q13467 585 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 LRRC32Q14392 662 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 KCNJ12Q14500 433 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 STX1AQ16623 288 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 SASS6Q6UVJ0 657 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 C1orf210Q8IVY1 113 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 TFAP2BQ92481 460 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 CHFRQ96EP1 664 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 TUBGCP2Q9BSJ2 902 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 NACA2Q9H009 215 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 CHRDQ9H2X0 955 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 NDST4Q9H3R1 872 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 ECT2Q9H8V3 914 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 NMUR1Q9HB89 426 aa12.14□□□□□ -0.47
SLIRP-205ENST00000556310 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
SLIRP-205ENST00000556310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms