RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 NMD3Q96D46 503 aaKnown RBP18.46■□□□□ 0.55
RCCD1-204ENST00000555737 ADPGKQ9BRR6 497 aa18.46■□□□□ 0.55
RCCD1-204ENST00000555737 SMYD2Q9NRG4 433 aa18.46■□□□□ 0.55
RCCD1-204ENST00000555737 AK5Q9Y6K8 562 aa18.46■□□□□ 0.55
RCCD1-204ENST00000555737 INO80B-WBP1J3KQ70 363 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 ZBED1O96006 694 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 CSH1P0DML2 217 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 CSH2P0DML3 217 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 ETV4P43268 484 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 RTP1P59025 263 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 PPP2R5DQ14738 602 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 SLC44A1Q8WWI5 657 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 ALKBH8Q96BT7 664 aaKnown RBP18.45■□□□□ 0.54
RCCD1-204ENST00000555737 INO80BQ9C086 356 aaPredicted RBP18.45■□□□□ 0.54
RCCD1-204ENST00000555737 TLE6Q9H808 572 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 STRIP2Q9ULQ0 834 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 SIPA1L1O43166 1804 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 EGFRP00533 1210 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 PROCP04070 461 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 AP2B1P63010 937 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 LBRQ14739 615 aaKnown RBP18.45■□□□□ 0.54
RCCD1-204ENST00000555737 HSF5Q4G112 596 aaPredicted RBP18.45■□□□□ 0.54
RCCD1-204ENST00000555737 SLC26A11Q86WA9 606 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 TMPRSS6Q8IU80 811 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 RNF148Q8N7C7 305 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 HEXIM2Q96MH2 286 aaKnown RBP18.45■□□□□ 0.54
RCCD1-204ENST00000555737 NIF3L1Q9GZT8 377 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 ZNF302Q9NR11 478 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 DNAJC16Q9Y2G8 782 aa18.45■□□□□ 0.54
RCCD1-204ENST00000555737 C3orf70A6NLC5 250 aaPredicted RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 ITM2AO43736 263 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 SLC25A11Q02978 314 aaKnown RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 STX3Q13277 289 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 VSIG10LQ86VR7 867 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 TMEM192Q8IY95 271 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 GALNT15Q8N3T1 639 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 DEPDC1BQ8WUY9 529 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 TRAPPC12Q8WVT3 735 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 PRPF31Q8WWY3 499 aaKnown RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 FOCADQ5VW36 1801 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 CNTNAP1P78357 1384 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 SYNJ2BP-COX16A0A087WUM0 186 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 RNASEH1O60930 286 aaKnown RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 HMGCRP04035 888 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 SNRPAP09012 282 aaKnown RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 HMGCS2P54868 508 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 PDE1BQ01064 536 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 OCRLQ01968 901 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 TRIP10Q15642 601 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 RABGAP1LQ5R372 815 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 BBS12Q6ZW61 710 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 TWNKQ96RR1 684 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 IFT122Q9HBG6 1241 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 COX16Q9P0S2 106 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 CCDC78A2IDD5 438 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 A6NJR5 290 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 PDGFRAP16234 1089 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 KCNA2P16389 499 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 SESN2P58004 480 aaPredicted RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 CNTN2Q02246 1040 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 CDC16Q13042 620 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 TTC39BQ5VTQ0 682 aaPredicted RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 RSBN1LQ6PCB5 846 aaPredicted RBP18.44■□□□□ 0.54
RCCD1-204ENST00000555737 ANKRD27Q96NW4 1050 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 PEBP4Q96S96 227 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 ECSITQ9BQ95 431 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 WWP1Q9H0M0 922 aa18.44■□□□□ 0.54
RCCD1-204ENST00000555737 OR6B1O95007 311 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 ASS1P00966 412 aaKnown RBP18.43■□□□□ 0.54
RCCD1-204ENST00000555737 POLR2BP30876 1174 aaKnown RBP18.43■□□□□ 0.54
RCCD1-204ENST00000555737 GTF2A2P52657 109 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 TGFB2P61812 414 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 MRPS5P82675 430 aaKnown RBP18.43■□□□□ 0.54
RCCD1-204ENST00000555737 LAMB3Q13751 1172 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 DRICH1Q6PGQ1 229 aaPredicted RBP18.43■□□□□ 0.54
RCCD1-204ENST00000555737 TUBB6Q9BUF5 446 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 MIS12Q9H081 205 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 CLIC5Q9NZA1 410 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 CNTNAP2Q9UHC6 1331 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 B4GALT5O43286 388 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 SAT1P21673 171 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 OSBPP22059 807 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 SLC18A1P54219 525 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 YWHAZP63104 245 aaKnown RBP18.43■□□□□ 0.54
RCCD1-204ENST00000555737 CAPSQ13938 189 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 HIC1Q14526 733 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 XKR3Q5GH77 459 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 MRIQ9BWK5 157 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 TAGLN3Q9UI15 199 aa18.43■□□□□ 0.54
RCCD1-204ENST00000555737 CCNFP41002 786 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 BTKQ06187 659 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 DUOXA2Q1HG44 320 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 ATG16L1Q676U5 607 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 NIPA1Q7RTP0 329 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 TTC13Q8NBP0 860 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 SEPT10Q9P0V9 454 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 ZNF212Q9UDV6 495 aa18.42■□□□□ 0.54
RCCD1-204ENST00000555737 ASB3Q9Y575 518 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms