RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 RNF8O76064 485 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 CALB1P05937 261 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 ACADSP16219 412 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 TFE3P19532 575 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 SFNP31947 248 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 FAM136AQ96C01 138 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 NMD3Q96D46 503 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 ZNF184Q99676 751 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 B3GNT5Q9BYG0 378 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 ZNF302Q9NR11 478 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 SEPT10Q9P0V9 454 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 LRCH1Q9Y2L9 728 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 CNTNAP2Q9UHC6 1331 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 A6NJR5 290 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 VWA5AO00534 786 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 SPATA31D3P0C874 917 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 RARBP10826 455 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 ANPEPP15144 967 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 MRPS5P82675 430 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 RBBP5Q15291 538 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 HADHQ16836 314 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 EEF1DP3Q658K8 133 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 PAOXQ6QHF9 649 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 SPATA31D4Q6ZUB0 917 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 TDRPQ86YL5 185 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 APOPT1Q96IL0 206 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 ADPGKQ9BRR6 497 aa17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 NTPCRQ9BSD7 190 aaKnown RBP17.74■□□□□ 0.43
PPP4R3A-208ENST00000555462 GOLGA8QA0A0J9YX86 632 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 GOLGA8OA6NCC3 632 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 SIGLEC16A6NMB1 481 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 GOLGA8NF8WBI6 632 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 HCRTO43612 131 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 RNASEH1O60930 286 aaKnown RBP17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PROCP04070 461 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PDGFRAP16234 1089 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 CCNFP41002 786 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PDE1BQ01064 536 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 SLC25A11Q02978 314 aaKnown RBP17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 TNS4Q8IZW8 715 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 KCTD17Q8N5Z5 321 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 DNAJC1Q96KC8 554 aaKnown RBP17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PHF12Q96QT6 1004 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PNPOQ9NVS9 261 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 CIB2O75838 187 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PIGHQ14442 188 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 GRAMD1BQ3KR37 738 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 NKD2Q969F2 451 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 CGRRF1Q99675 332 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 OXCT2Q9BYC2 517 aaPredicted RBP17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 PHACTR1Q9C0D0 580 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 VPS11Q9H270 941 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 NDE1Q9NXR1 346 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 DNAJC16Q9Y2G8 782 aa17.73■□□□□ 0.43
PPP4R3A-208ENST00000555462 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 WNK3Q9BYP7 1800 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 SPECC1L-ADORA2AF8WAN1 911 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 GOLGA8TH3BQL2 631 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 NEMP1O14524 444 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 LYPLA2O95372 231 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 ETV4P43268 484 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 TGFB2P61812 414 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 RASSF3Q86WH2 238 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 SCUBE3Q8IX30 993 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 MTO1Q9Y2Z2 717 aaKnown RBP17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 CCNG1P51959 295 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 RTP1P59025 263 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 C7orf31Q8N865 590 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 RNPEPQ9H4A4 650 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 SAR1AQ9NR31 198 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 CLIC5Q9NZA1 410 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 USP12O75317 370 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 ZBED1O96006 694 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 ASS1P00966 412 aaKnown RBP17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 TCN1P20061 433 aaPredicted RBP17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 NUMBP49757 651 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 RAB27AP51159 221 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 USP4Q13107 963 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 CIAPIN1Q6FI81 312 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 TRIM72Q6ZMU5 477 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 NIF3L1Q9GZT8 377 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 SDCBP2Q9H190 292 aa17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 DRG1Q9Y295 367 aaKnown RBP17.72■□□□□ 0.43
PPP4R3A-208ENST00000555462 CFLARO15519 480 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 ITGB3P05106 788 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 LYNP07948 512 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 NELFEP18615 380 aaKnown RBP17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 GSTT1P30711 240 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 ASPHQ12797 758 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 LY6KQ17RY6 165 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 HPS6Q86YV9 775 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 RELL1Q8IUW5 271 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 RXFP2Q8WXD0 754 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 NDRG1Q92597 394 aaKnown RBP17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 AZIN2Q96A70 460 aa17.71■□□□□ 0.43
PPP4R3A-208ENST00000555462 PCDHGB4Q9UN71 923 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms