RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 NDUFV1P49821 464 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 VCPP55072 806 aaKnown RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 SNX1Q13596 522 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 DPYSL2Q16555 572 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 HADHQ16836 314 aaKnown RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 HIBCHQ6NVY1 386 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 STRADAQ7RTN6 431 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 FAM172AQ8WUF8 416 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 RIN2Q8WYP3 895 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 TBCBQ99426 244 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 KRT82Q9NSB4 513 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 TBC1D13Q9NVG8 400 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 TMEM161AQ9NX61 479 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 NOD1Q9Y239 953 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 LRRD1A4D1F6 860 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 NRP1O14786 923 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 CCL5P13501 91 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 LCP1P13796 627 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 PECAM1P16284 738 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 L1CAMP32004 1257 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 GJC1P36383 396 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 MATKP42679 507 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 ATXN1P54253 815 aaKnown RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 ADIGQ0VDE8 80 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 MRPL58Q14197 206 aaKnown RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 PM20D1Q6GTS8 502 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 RELL1Q8IUW5 271 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 CCDC105Q8IYK2 499 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 PLD5Q8N7P1 536 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 GRK7Q8WTQ7 553 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 NDRG1Q92597 394 aaKnown RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 MYLPFQ96A32 169 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 PGAP3Q96FM1 320 aaPredicted RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 SNRNP25Q9BV90 132 aaKnown RBP9.31□□□□□ -0.92
TDP1-210ENST00000554976 RHOBTB2Q9BYZ6 727 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 PCDH18Q9HCL0 1135 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 DSEQ9UL01 958 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 PLXNA4Q9HCM2 1894 aa9.31□□□□□ -0.92
TDP1-210ENST00000554976 APOC4-APOC2K7ER74 178 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 APOC2P02655 101 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 RABGGTBP53611 331 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 DAOAP59103 153 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 PITX1P78337 314 aaPredicted RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 MMRN1Q13201 1228 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 NOMO2Q5JPE7 1267 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 EMC10Q5UCC4 262 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 HFE2Q6ZVN8 426 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 SNF8Q96H20 258 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 KCNK16Q96T55 309 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 FMO2Q99518 471 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 ZCWPW1Q9H0M4 648 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 PNPLA8Q9NP80 782 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 MARCH5Q9NX47 278 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 DNAJB4Q9UDY4 337 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 FZD10Q9ULW2 581 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 NYNRINQ9P2P1 1898 aaKnown RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 CEP350Q5VT06 3117 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 GOLGA6BA6NDN3 693 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 I6L893 689 aaPredicted RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 TNFRSF10BO14763 440 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 HSF2BPO75031 334 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 OAZ2O95190 189 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 AMHP03971 560 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 NUDT17P0C025 328 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 YY1P25490 414 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 GTF2A1P52655 376 aaPredicted RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 GDF10P55107 478 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 SNX16P57768 344 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 BYSLQ13895 437 aaKnown RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 PDK2Q15119 407 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 SLC25A52Q3SY17 297 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 DSTYKQ6XUX3 929 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 PRUNE1Q86TP1 453 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 CCDC185Q8N715 623 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 RTP4Q96DX8 246 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 MAGEB5Q9BZ81 275 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.3□□□□□ -0.92
TDP1-210ENST00000554976 PCSK1NQ9UHG2 260 aa9.3□□□□□ -0.92
TDP1-210ENST00000554976 FARP1Q9Y4F1 1045 aaPredicted RBP9.3□□□□□ -0.92
TDP1-210ENST00000554976 TBC1D4O60343 1298 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 RNF8O76064 485 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 IGLV3-25P01717 112 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 FAM200BP0CF97 657 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 ITIH2P19823 946 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 SDC4P31431 198 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 CHKAP35790 457 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 MAP3K7CLP57077 242 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 OTUD4Q01804 1114 aaKnown RBP9.29□□□□□ -0.92
TDP1-210ENST00000554976 ZNF844Q08AG5 666 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 SEMA3BQ13214 749 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 NOMO1Q15155 1222 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 EFHC1Q5JVL4 640 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 SLC39A5Q6ZMH5 540 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 PCDH19Q8TAB3 1148 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 APBB2Q92870 758 aa9.29□□□□□ -0.92
TDP1-210ENST00000554976 SMARCD1Q96GM5 515 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms