RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 MTCL1Q9Y4B5 1905 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 LAMA2P24043 3122 aaKnown RBP6.22□□□□□ -1.41
ATXN3-230ENST00000554673 ATP8B3O60423 1300 aa6.22□□□□□ -1.41
ATXN3-230ENST00000554673 CHD5Q8TDI0 1954 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 A0A0U1RQF3 1178 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TCRBV7S2A1N4TA0A589 114 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CASTOR2A6NHX0 329 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CCDC85CA6NKD9 419 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 HHLA1C9JL84 531 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CLDN5O00501 218 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 GABRDO14764 452 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 ADAM12O43184 909 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 PQBP1O60828 265 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MTA2O94776 668 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 ERLIN2O94905 339 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 KIF4AO95239 1232 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 FTCDO95954 541 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 ERBB2P04626 1255 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CYP1A2P05177 515 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CCDC175P0C221 793 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 SCP2P22307 547 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 RRM1P23921 792 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 HOXD10P28358 340 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 AXLP30530 894 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MATR3P43243 847 aaKnown RBP eCLIP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MAGEA1P43355 309 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CLCNKBP51801 687 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 NDST1P52848 882 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CCL23P55773 120 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TBX4P57082 545 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TAS2R40P59535 323 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 LILRA4P59901 499 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 RPL7AP62424 266 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 POU5F1Q01860 360 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 BIRC3Q13489 604 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 SIX1Q15475 284 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TAF5Q15542 800 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 DUOXA2Q1HG44 320 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 ZNF699Q32M78 642 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 SLC9C1Q4G0N8 1177 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 PAN2Q504Q3 1202 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TDRD12Q587J7 1177 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 ZNF569Q5MCW4 686 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CCDC122Q5T0U0 273 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 NAA35Q5VZE5 725 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 PAPD7Q5XG87 772 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 WSCD1Q658N2 575 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 LRRC8DQ7L1W4 858 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TAS1R1Q7RTX1 841 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 GPRIN1Q7Z2K8 1008 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CACNA2D4Q7Z3S7 1137 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 RNF180Q86T96 592 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 NT5DC3Q86UY8 548 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CREG2Q8IUH2 290 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 COLGALT2Q8IYK4 626 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MCOLN2Q8IZK6 566 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 PDCL2Q8N4E4 241 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TTC9BQ8N6N2 239 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 NOA1Q8NC60 698 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 RNF169Q8NCN4 708 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 C1orf131Q8NDD1 294 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 STKLD1Q8NE28 680 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 OR10T2Q8NGX3 314 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CLEC4CQ8WTT0 213 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CPA5Q8WXQ8 436 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 ANP32BQ92688 251 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 HPDLQ96IR7 371 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MS4A14Q96JA4 679 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 HSH2DQ96JZ2 352 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 B3GALT6Q96L58 329 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 CPXM1Q96SM3 734 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 IFIH1Q9BYX4 1025 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MCOLN1Q9GZU1 580 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 RGS18Q9NS28 235 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 R3HCC1Q9Y3T6 440 aaKnown RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 TIMM13Q9Y5L4 95 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-230ENST00000554673 MRFAP1Q9Y605 127 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 NUP205Q92621 2012 aa6.21□□□□□ -1.42
ATXN3-230ENST00000554673 C2orf16Q68DN1 1984 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 TNRC18O15417 2968 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-230ENST00000554673 A0A1W2PP55 124 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 BTNL10A8MVZ5 291 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 PDPK1O15530 556 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 HYAL3O43820 417 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-230ENST00000554673 TADA3O75528 432 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 PALMO75781 387 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 CABYRO75952 493 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 POMCP01189 267 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 PF4P02776 101 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 FTLP02792 175 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-230ENST00000554673 TMEM253P0C7T8 217 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 FAM157BP0CG42 384 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 CCDC130P13994 396 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 SELPP16109 830 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 ABCB4P21439 1286 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 ACAT1P24752 427 aaKnown RBP6.2□□□□□ -1.42
ATXN3-230ENST00000554673 GPD2P43304 727 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 RPL34P49207 117 aaKnown RBP6.2□□□□□ -1.42
ATXN3-230ENST00000554673 LIG3P49916 1009 aa6.2□□□□□ -1.42
ATXN3-230ENST00000554673 HADHBP55084 474 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms