RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 THOC1Q96FV9 657 aaKnown RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 SMC6Q96SB8 1091 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 PAFAH2Q99487 392 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 DHRS4Q9BTZ2 278 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 C12orf65Q9H3J6 166 aaKnown RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 FAM124BQ9H5Z6 455 aaPredicted RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 GOLGA2P5Q9HBQ8 144 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 SLCO1B3Q9NPD5 702 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 DERAQ9Y315 318 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 CEP350Q5VT06 3117 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 A6NJR5 290 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 A8MXQ7 604 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 NDC80O14777 642 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 DNAJC8O75937 253 aaPredicted RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 SUN1O94901 812 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 SDC4P31431 198 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 STIP1P31948 543 aaKnown RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 ELK3P41970 407 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 IL9RQ01113 521 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 RNASELQ05823 741 aaKnown RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 XRCC4Q13426 336 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 TFDP2Q14188 446 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 MTFR1Q15390 333 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 STILQ15468 1287 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 PPP6R3Q5H9R7 873 aaPredicted RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 FAM47CQ5HY64 1035 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 FAXCQ5TGI0 409 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 NOTUMQ6P988 496 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 CCDC33Q8N5R6 958 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 MZB1Q8WU39 189 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 DCAKDQ8WVC6 231 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 ACSS3Q9H6R3 686 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 KLC4Q9NSK0 619 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 FLRT1Q9NZU1 646 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 CNTN3Q9P232 1028 aa12.73□□□□□ -0.37
LRP1-207ENST00000554174 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
LRP1-207ENST00000554174 SMIM28A0A1B0GU29 152 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 MBLAC1A4D2B0 266 aaPredicted RBP12.72□□□□□ -0.37
LRP1-207ENST00000554174 RRN3P2A6NIE6 340 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 GOLGA8RI6L899 631 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 KCNN4O15554 427 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 F2P00734 622 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 CYP2C9P11712 490 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 CA4P22748 312 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 RBL1P28749 1068 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 ADORA2BP29275 332 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 SOX4Q06945 474 aaPredicted RBP12.72□□□□□ -0.37
LRP1-207ENST00000554174 RASA2Q15283 850 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 BOLA3Q53S33 107 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 OLFML2BQ68BL8 750 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 SESTD1Q86VW0 696 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 FITM2Q8N6M3 262 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 LRRC52Q8N7C0 313 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 ANKLE1Q8NAG6 615 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 BEST2Q8NFU1 509 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 KLF6Q99612 283 aaPredicted RBP12.72□□□□□ -0.37
LRP1-207ENST00000554174 PITPNM3Q9BZ71 974 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
LRP1-207ENST00000554174 PHACTR1Q9C0D0 580 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 ARL2BPQ9Y2Y0 163 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 SCN4AP35499 1836 aa12.72□□□□□ -0.37
LRP1-207ENST00000554174 PDCD11Q14690 1871 aaKnown RBP12.72□□□□□ -0.37
LRP1-207ENST00000554174 PIRO00625 290 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 IGFBP6P24592 240 aaPredicted RBP12.71□□□□□ -0.37
LRP1-207ENST00000554174 PHBP35232 272 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 BCAR1P56945 870 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 PDK2Q15119 407 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 FAM110CQ1W6H9 321 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 GALNTL6Q49A17 601 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 SLC9A4Q6AI14 798 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 CYB5D1Q6P9G0 228 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 RAB6BQ9NRW1 208 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 HESX1Q9UBX0 185 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 PIN4Q9Y237 131 aaKnown RBP12.71□□□□□ -0.37
LRP1-207ENST00000554174 TEX264Q9Y6I9 313 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 NRCAMQ92823 1304 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.71□□□□□ -0.37
LRP1-207ENST00000554174 TCRBV9S1A1TA0A576 114 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 APOL1O14791 398 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 TREHO43280 583 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 LCP1P13796 627 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 SLC18A1P54219 525 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 SLC10A2Q12908 348 aaPredicted RBP12.71□□□□□ -0.37
LRP1-207ENST00000554174 SPARCL1Q14515 664 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 SNX17Q15036 470 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 FBXO47Q5MNV8 452 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 ARHGAP17Q68EM7 881 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 ECHDC2Q86YB7 292 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 MAP7D3Q8IWC1 876 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 CCDC63Q8NA47 563 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 ARRDC4Q8NCT1 418 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 TEKT4Q8WW24 435 aa12.71□□□□□ -0.37
LRP1-207ENST00000554174 NDRG1Q92597 394 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms