RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 HCFC2Q9Y5Z7 792 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 MYO7AQ13402 2215 aa15.21■□□□□ 0.03
SHMT2-210ENST00000553950 ANAPC1Q9H1A4 1944 aa15.21■□□□□ 0.02
SHMT2-210ENST00000553950 RANBP2P49792 3224 aaKnown RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 HELZP42694 1942 aaKnown RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 RCCD1A6NED2 376 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 DPYSL4O14531 572 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 CAPN9O14815 690 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 USP17L7P0C7H9 530 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 RALAP11233 206 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 GPD1P21695 349 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 SDC4P31431 198 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 SLC1A1P43005 524 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 NRIP1P48552 1158 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 GPR15P49685 360 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 YWHAZP63104 245 aaKnown RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 IFRD2Q12894 506 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 PIGHQ14442 188 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 PABPC1LQ4VXU2 614 aaKnown RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 SCUBE3Q8IX30 993 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 NIPA2Q8N8Q9 360 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 STKLD1Q8NE28 680 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 ZNF512Q96ME7 567 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 GAS2L1Q99501 681 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 ABCC13Q9NSE7 274 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 CLIC5Q9NZA1 410 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.2■□□□□ 0.02
SHMT2-210ENST00000553950 TJP2Q9UDY2 1190 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 ZMYM5Q9UJ78 669 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 PCDHGC5Q9Y5F6 944 aa15.2■□□□□ 0.02
SHMT2-210ENST00000553950 TMEM191CA6NGB0 347 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 ESPNB1AK53 854 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 PIK3R2O00459 728 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 SOAT2O75908 522 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 PFKLP17858 780 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 CDC25CP30307 473 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 NOS2P35228 1153 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 MATKP42679 507 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 PTPN9P43378 593 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 TUBP50607 506 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 ZNF143P52747 638 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-210ENST00000553950 YWHAGP61981 247 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHMT2-210ENST00000553950 C2CD6Q53TS8 623 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 BTBD8Q5XKL5 378 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 DNAAF5Q86Y56 855 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 CMASQ8NFW8 434 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-210ENST00000553950 TPCN2Q8NHX9 752 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 SLC2A13Q96QE2 648 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 CNPY3Q9BT09 278 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 OSGEPQ9NPF4 335 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 ASAH2Q9NR71 780 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHMT2-210ENST00000553950 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 TMEM59LQ9UK28 342 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 PAXBP1Q9Y5B6 917 aa15.19■□□□□ 0.02
SHMT2-210ENST00000553950 CLUHO75153 1309 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 RNF8O76064 485 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 PAPLNO95428 1278 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 EPCAMP16422 314 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 POU3F3P20264 500 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-210ENST00000553950 PSMA2P25787 234 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 CDR1P51861 262 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 SDHAF4Q5VUM1 108 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 ADGRD2Q7Z7M1 963 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 DAAM2Q86T65 1068 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 EFHBQ8N7U6 833 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 SCAMP5Q8TAC9 235 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 GIPC2Q8TF65 315 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 CLEC4CQ8WTT0 213 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 RNF139Q8WU17 664 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 TRIM10Q9UDY6 481 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 MAGED2Q9UNF1 606 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-210ENST00000553950 C2orf16Q68DN1 1984 aa15.18■□□□□ 0.02
SHMT2-210ENST00000553950 NUP210Q8TEM1 1887 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 FAM170AA1A519 330 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 USP27XA6NNY8 438 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 YJEFN3A6XGL0 299 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 E7ENQ6 273 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 BUB1O43683 1085 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 GABBR2O75899 941 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 PROSCO94903 275 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 F9P00740 461 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 PDGFRAP16234 1089 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 DDX6P26196 483 aaKnown RBP eCLIP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 RFC1P35251 1148 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 TAF10Q12962 218 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 MTA1Q13330 715 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 SNX30Q5VWJ9 437 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 BSPRYQ5W0U4 402 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 TMEM184AQ6ZMB5 413 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 RSRC2Q7L4I2 434 aaKnown RBP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 STRADAQ7RTN6 431 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 BHLHA9Q7RTU4 235 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 DNAJB7Q7Z6W7 309 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 RBM23Q86U06 439 aaKnown RBP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 PIWIL1Q96J94 861 aaKnown RBP15.17■□□□□ 0.02
SHMT2-210ENST00000553950 PRDM12Q9H4Q4 367 aa15.17■□□□□ 0.02
SHMT2-210ENST00000553950 GMIPQ9P107 970 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms