RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 C2orf49Q9BVC5 232 aaPredicted RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 TRMT61BQ9BVS5 477 aaKnown RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 NACA2Q9H009 215 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 SAP130Q9H0E3 1048 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 INTS2Q9H0H0 1204 aaKnown RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 FBXO44Q9H4M3 255 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 KIF9Q9HAQ2 790 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 ZNF334Q9HCZ1 680 aaPredicted RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 KRT82Q9NSB4 513 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 GCNT4Q9P109 453 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 WNT16Q9UBV4 365 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 FAM86C2PA6NEL3 165 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 SMTNL1A8MU46 457 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 BECN2A8MW95 431 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 KCNJ18B7U540 433 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 NDUFB5O43674 189 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 F11P03951 625 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 USP17L7P0C7H9 530 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 VDRP11473 427 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 KRT5P13647 590 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 CCDC130P13994 396 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 HMGA1P17096 107 aaKnown RBP8.81□□□□□ -1
PSEN1-209ENST00000553855 PFKLP17858 780 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 PSMC3P17980 439 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 MAP3K7CLP57077 242 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TAGLNQ01995 201 aaKnown RBP8.81□□□□□ -1
PSEN1-209ENST00000553855 MYL5Q02045 173 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 GCNT1Q02742 428 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 KCNJ12Q14500 433 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 STILQ15468 1287 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 CCDC142Q17RM4 750 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 FKBP15Q5T1M5 1219 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TANGO2Q6ICL3 276 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TMEM270Q6UE05 265 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 RBM43Q6ZSC3 357 aaKnown RBP8.81□□□□□ -1
PSEN1-209ENST00000553855 GAREM2Q75VX8 874 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 MON1AQ86VX9 555 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 ARID3BQ8IVW6 561 aaPredicted RBP8.81□□□□□ -1
PSEN1-209ENST00000553855 CMTM8Q8IZV2 173 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 CELF5Q8N6W0 485 aaKnown RBP8.81□□□□□ -1
PSEN1-209ENST00000553855 MAB21L3Q8N8X9 362 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 C12orf29Q8N999 325 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TTC16Q8NEE8 873 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 FLCNQ8NFG4 579 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 OVCA2Q8WZ82 227 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 EXOC4Q96A65 974 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 MYRFLQ96LU7 910 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TUBGCP2Q9BSJ2 902 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 LRRC3Q9BY71 257 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TRPV4Q9HBA0 871 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 PNPLA8Q9NP80 782 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 UBE2TQ9NPD8 197 aaPredicted RBP8.81□□□□□ -1
PSEN1-209ENST00000553855 SLC2A4RGQ9NR83 387 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 PGPEP1Q9NXJ5 209 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 OBP2AQ9NY56 170 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 HMGXB4Q9UGU5 601 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 CA14Q9ULX7 337 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 HCN4Q9Y3Q4 1203 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 NFE2L3Q9Y4A8 694 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 XIRP2A4UGR9 3374 aa8.81□□□□□ -1
PSEN1-209ENST00000553855 TSC2P49815 1807 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 CACNA1AO00555 2505 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 GTPBP10A4D1E9 387 aaKnown RBP8.8□□□□□ -1
PSEN1-209ENST00000553855 HEPACAM2A8MVW5 462 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 MED7O43513 233 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 MOSPD3O75425 235 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 PAEPP09466 180 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 HDCP19113 662 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 GDI1P31150 447 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 USP8P40818 1118 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 VIPR2P41587 438 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 KPNA1P52294 538 aaPredicted RBP8.8□□□□□ -1
PSEN1-209ENST00000553855 SLC5A3P53794 718 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 GPC5P78333 572 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 AMPD2Q01433 879 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 GOLGA8FQ08AF8 430 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 GOLGA8DPQ0D2H9 430 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TAF10Q12962 218 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 KLHL40Q2TBA0 621 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 VWA3BQ502W6 1294 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 ARHGAP29Q52LW3 1261 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 HSP90AA4PQ58FG1 418 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TBCELQ5QJ74 424 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TXNDC8Q6A555 127 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 RRAGAQ7L523 313 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 BMP8AQ7Z5Y6 402 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TADA2BQ86TJ2 420 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 DDX42Q86XP3 938 aaKnown RBP eCLIP8.8□□□□□ -1
PSEN1-209ENST00000553855 MFSD6LQ8IWD5 586 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 FUKQ8N0W3 1084 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 ST13P5Q8NFI4 369 aaPredicted RBP8.8□□□□□ -1
PSEN1-209ENST00000553855 BPIFB1Q8TDL5 484 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 DNASE1L2Q92874 299 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 KCNK16Q96T55 309 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 CRACR2AQ9BSW2 395 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 LRFN3Q9BTN0 628 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 DUSP16Q9BY84 665 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 NDST4Q9H3R1 872 aa8.8□□□□□ -1
PSEN1-209ENST00000553855 TLR8Q9NR97 1041 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms